Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00019 ATGTCGCTCACCATGGCGGCTCTCCTTTGTCTTTCTCTCTTCGCCATCGCTGCTGTCGCTGAAGATCCCTACAGGTTCTTCAACTGGAATGTTACATACGGAGACATTTATCCACTTGGTGTTCGCCAACAGGGAATACTTATCAACGGTCAATTCCCAGGTCCAGACATTCATTCTGTTACAAACGACAACCTCATCATCAATGTCTTCAACAGCTTAGACCAACCCTTTCTCCTATCCTGGAACGGGGTGCAGCAGAGAAGGAACTCGTTCGAAGACGGGGTTTGGGGAACAACATGTCCCATTCCACCAGGAGGGAACTTCACATACATACTTCAGGTGAAGGATCAAATTGGAAGCTTCTACTACTTCCCGTCTCTTGCATTCCACAAAGCTGCCGGTGGATTTGGAGGTCTCAGGATTCTGAGCAGACCCAGAATTCCAGTCCCTTTCGACGATCCCGCCGGTGATTACACTGTCCTCATTGGAGATTGGTACAAGTTCAACCACACGGATTTGCAGGCTATTCTTGATAGAGGTAGTAAGTTGCCTTTCCCTGATGGAATCCTCATCAATGGTCGTGGCTCTAACGGAGCATCTTTCAATGTGGAACAAGGAAAGACGTACAGGCTGAGAATATCAAATGTGGGGTTGGAAAATTCCCTGAATTTCCGCATACAAAACCACAAATTAAAGCTGGTAGAAGTGGAAGGAACGCACACGGTTCAGACAACGTACTCATCTCTTGACGTGCATGTGGGCCAGTCTTACTCTGTTCTGGTCACTGCGGATCAACCTGCTCAGGACTATTACATCGTCGTCTCCTCTCGATTTACCTCTACAGTCCTCACCTCCACTGCCATTCTTCGCTACGCCAACTCCGCTGGCCCGGTCTCAGGCCCACCCCCTGGTGGACCTACCATCCAGATTGATTGGTCTCTGAACCAGGCCCGCTCCATCAGGACGAACCTGACAGCAAGTGGACCAAGGCCGAACCCGCAAGGATCGTACCACTACGGTCTGATAAACACCACGAGGACCATCATACTGTCGGGTTCAGCAGGTATAGTGAATGGCAAGCAGAGATACGGAATCAACAGTGTGTCTTACGTTGCTCCGGACACTCCTCTTAAGCTCGCCGACTACTTCAAAATCCCTGGTGTTTTCCGTGTTGGAAGCATTTCCGACAGGCCCACCGGTGGTGGCATTTACCTTGACACATCTGTTATGCAAACCGACTACAGAACATTTGTGGAGATTGTCTTCCAAAACGACGAAGACGTAATTCAGAGCTACCATCTCGATGGCTACTCTTTCTTTGTGGTTGGTATGGATGGAGGACAGTGGACGGCTGCTAGCAGGAACCAGTACAATCTTCGAGATGCAGTTTCGCGGTGCACCACTCAGGTATATCCCAAGTCATGGACCGCAATCTATATTCCGCTTGACAACGTGGGAATGTGGAACTTGAGATCTGAATTTTGGGCACGCCAATACCTTGGCCAACAGTTTTATATGCGCGTTTATACAACATCAACCTCAATCAGAGATGAATATCCTGTTCCAAAGAATGCTCTGCTTTGTGGTAGAGCAAGTGGCAGACACACTCGACCCCTTTGA 1620 0.4907 MSLTMAALLCLSLFAIAAVAEDPYRFFNWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSFEDGVWGTTCPIPPGGNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGLRILSRPRIPVPFDDPAGDYTVLIGDWYKFNHTDLQAILDRGSKLPFPDGILINGRGSNGASFNVEQGKTYRLRISNVGLENSLNFRIQNHKLKLVEVEGTHTVQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVVSSRFTSTVLTSTAILRYANSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTRTIILSGSAGIVNGKQRYGINSVSYVAPDTPLKLADYFKIPGVFRVGSISDRPTGGGIYLDTSVMQTDYRTFVEIVFQNDEDVIQSYHLDGYSFFVVGMDGGQWTAASRNQYNLRDAVSRCTTQVYPKSWTAIYIPLDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSIRDEYPVPKNALLCGRASGRHTRPL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00019 539 SUPERFAMILY Cupredoxins 151 331 IPR008972 -
Phco2g00019 539 FunFam Monocopper oxidase-like protein 341 538 - -
Phco2g00019 539 Pfam Multicopper oxidase 376 511 IPR011706 GO:0005507|GO:0016491
Phco2g00019 539 Pfam Multicopper oxidase 157 293 IPR001117 -
Phco2g00019 539 Gene3D - 155 330 IPR008972 -
Phco2g00019 539 FunFam L-ascorbate oxidase homolog 24 145 - -
Phco2g00019 539 CDD CuRO_2_AAO_like_1 156 291 IPR034271 -
Phco2g00019 539 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Phco2g00019 539 PANTHER MULTI-COPPER OXIDASE 43 507 IPR045087 -
Phco2g00019 539 Gene3D - 24 145 IPR008972 -
Phco2g00019 539 Gene3D - 340 535 IPR008972 -
Phco2g00019 539 FunFam Monocopper oxidase-like protein 155 329 - -
Phco2g00019 539 SUPERFAMILY Cupredoxins 18 171 IPR008972 -
Phco2g00019 539 CDD CuRO_3_AAO_like_1 373 493 IPR034275 GO:0005507
Phco2g00019 539 SUPERFAMILY Cupredoxins 341 530 IPR008972 -
Phco2g00019 539 CDD CuRO_1_AAO_like_1 26 141 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00019 Phco-Chr2 387470 391402 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00019 2 387470 391402 Phco2g00019 2 387470 391402 ECH
Phco2g00019 2 387470 391402 Phco7g00237 7 1593330 1598330 PCT