Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00018 ATGGCGGGTCAGTGGTCCAATGAAGGCTCCAGTACTGGAAATATTTCAGCAGAGTGTTCAGATTCAACTGTTCAGCTCAATATCAAGACTCTGGATTCCCGCATCTACAGTTTTGAAGTGAACAAAAATATGCCTGTTTCGTTGTTCAAAGAGAAAATTGCAAATGAAATTGGTGTTCCAGTTAGTCAGCAACGACTGATATTTAGAGGAAAAGTCTTGAAGGATGAACATGTTCTTTCTGAGTATCATGTTGAGAATGGGCATACATTGCATTTAGTTGAAAGACAACCAAATCAGCCGCAGGCTTCTGGTACGAGTGCTGATGAGCCCACTGGTACAAGTAGTAACCGAGGAAATGATGTGGGCTCAGGTCCTCCTCGTAACCGTGTTGGGCAAATTTCACACAGTGTTGTTCTTGGGACATTTAACGTGGGGGAACAGGGTGAAGGAATTGTTCATGACCTCACTCGGGTTATTGGGCATGTTTTAAATTCTATTGGAAACGGTGGCCAGAGTACAGTTAATGGTCCTAATGCTGCGCAAACTTCTTCAGCTCACCCAGGCAATGAAACTGAAGGAATGCATGCTGGAAATCAAAACCCAGCAGGAAACCAGGCACCATCTGGACAGACATTTCATGGTCCGACATTCCAATCTGTGTCTCATGTTGTTCAGATTCCTGCAGCAGCTGGATCCATACCCCTCCCATCTCTCAATGCACCAATTCCTGATTCATTGAACACACTGATTGAGTTTATGAATCGAATGGAACACACACTGACACAAAATGGTTATCAGTCTAATTTTTCACCAGCTAACCCTGGAGACCAGCGAGTGGAATTGCCTTCTAATTCGCAAGGGTTGCCAAATATTGAAGCATTAAGTATTGTCTTGCGTCATGCAGAACGGTTACTTGGTGGTCAAGCTGTTGCTGCACTATCTCATATTGCAGGACGCTTGGAAAGAGAAAGAGCTTCTGCTGATCCACGTATAAGAGGTCAAATACAGTCAGAGTCAGTGCAAATAGGACTTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTTGGCCGGACAATGTTGACACTGCGAATGGGACAATCTTCTGCAGAATCAGTTGTTAATGCTGGACCAGCTGTTTACATTTCTCCATCAGGGCCAAATCCTATAATGGCGCAGCCTTTTCCACTTCAGACAAGCTCCCTCTTTGGTGGTCCAGTTCCCTCCTCAACTCCTGCTACTTTGGGTACCATTGGTATTGGAAGTGCTCCTAGGAACGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCGATGGTTTCAGCAATTGGTTCTAGGCCAAATAATGGAGAAGGGACAAGAAGTGAACAGCATAATGAGCCTGGTTCTGGTGGTTCAGGTTCATCACGGGTACTACCTGTTAGAAATGTCATAGCCACAGCTATCCCATCACACCCTCCTGGTGTTGGAGTCCCTAGTAGCACACAAACTGGGTTTGGTGTTTCTACTTCACAGCCACCTGATTCAGCTTCATTGTCATCTGTTTTAGCTGAAATTGATTCTCGCCTTAGGAATGTTGTTGGTAGTATGCAAGGGGATAACACAGTTTCATCAGGGGAAATGGGATCAATCAGCAGGGACTTGTCTTCTGGATCTGAATCAAGACCTTCTACACTAAATGCACAGCAAGATACAACGGAAATGAATGGTGTTGGGGCTGCCAGTGCTTCCTTAGTTGGCTGTACTTCTGAAAGTGAGGCACAGAAGCTCCAAACTGAGGCAGGCCAAACCTCTAGTAATGATGAGAGAGATGTTTTGGTTGACAAATTTGTTTCTTCTAAACAAGATTTACAAAGTTGTTCTAGTGGAGAAACAATAGTAAAACCAGAAAATGAAATCGATGTTCCAGCAGTTAGTGACAGACAAGATGTAACTGAACCTGCCAAAGCTGCTCCACTAGGATTGGGTGTGGGTGGCTTAGAGCGTAAGAAAAGAACCAGACCTCAACCTCCTGTGAGTAAAGTTGCTGATGATGGATCATCCAGTTCTTCTGTCAATCAAAATCAGCAAACCAGAACAGATGGTCAACATATATTGCAAAGTCTTGCAAGTCATGGATCTGCTTTGAATTCAAGAAATGCTAATGGGCCACCCCAGCGGCCCTTGCCCTCCAGTGATCGCTCGATGGATGTGGCTGGTTTAATGTCTCAGGCCTTACAAAGTCCTGCTTTGAATGGTTTGTTGGAAGGGGTTTCACAGCAAACCGGAGTTGACTCACCCGATGGTTTGAGGAATATGTTGCAGCAGTTCACACAGAGCCCACAGCTGATGAATACAGTCAACCAAATTGTCCAACAGGTTGGCAGTCAGGATGTGGGGAATATGTTTGCTGGAGCGGAAAGAGGGCAGGGTGGTGGTATTGACATTTCAAGGATGTTTCAACAGATGATGCCCATTGTATCTCAAGCTCTTGGTGGGGCAAATCCTTCCTCACTGTTCTCTGTTGAAGAAGATGAACCTGGTGCATCCTACCAGGATGGAACAGTTGTCAGAGATGAATATTCTGATAATCAAAGTTTACAGCTCGACCTTCAACCACTGGCTGAGAGGATTGGACATTTGAGTCCTCCTGTAGATATTTTCCGTGCAGTAGCTGAAAATGCTGTCCAGCTATCGGGCTCTGGAATTGCTTCTAATGATCTTGTGGATGAGTTATGCCACAATGAGAGTCTTGCCAGGGAATATGTAGATATATTGCGATGTGATGTAAGTAAGCTGCTCGAGGGACATTCTGAGCCGGACAAATTCTAA 2814 0.4485 MAGQWSNEGSSTGNISAECSDSTVQLNIKTLDSRIYSFEVNKNMPVSLFKEKIANEIGVPVSQQRLIFRGKVLKDEHVLSEYHVENGHTLHLVERQPNQPQASGTSADEPTGTSSNRGNDVGSGPPRNRVGQISHSVVLGTFNVGEQGEGIVHDLTRVIGHVLNSIGNGGQSTVNGPNAAQTSSAHPGNETEGMHAGNQNPAGNQAPSGQTFHGPTFQSVSHVVQIPAAAGSIPLPSLNAPIPDSLNTLIEFMNRMEHTLTQNGYQSNFSPANPGDQRVELPSNSQGLPNIEALSIVLRHAERLLGGQAVAALSHIAGRLERERASADPRIRGQIQSESVQIGLAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMAQPFPLQTSSLFGGPVPSSTPATLGTIGIGSAPRNVNIHIHAGTSLAPMVSAIGSRPNNGEGTRSEQHNEPGSGGSGSSRVLPVRNVIATAIPSHPPGVGVPSSTQTGFGVSTSQPPDSASLSSVLAEIDSRLRNVVGSMQGDNTVSSGEMGSISRDLSSGSESRPSTLNAQQDTTEMNGVGAASASLVGCTSESEAQKLQTEAGQTSSNDERDVLVDKFVSSKQDLQSCSSGETIVKPENEIDVPAVSDRQDVTEPAKAAPLGLGVGGLERKKRTRPQPPVSKVADDGSSSSSVNQNQQTRTDGQHILQSLASHGSALNSRNANGPPQRPLPSSDRSMDVAGLMSQALQSPALNGLLEGVSQQTGVDSPDGLRNMLQQFTQSPQLMNTVNQIVQQVGSQDVGNMFAGAERGQGGGIDISRMFQQMMPIVSQALGGANPSSLFSVEEDEPGASYQDGTVVRDEYSDNQSLQLDLQPLAERIGHLSPPVDIFRAVAENAVQLSGSGIASNDLVDELCHNESLAREYVDILRCDVSKLLEGHSEPDKF 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00018 937 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 9 935 - -
Phco2g00018 937 PRINTS Ubiquitin signature 34 54 IPR019956 -
Phco2g00018 937 PRINTS Ubiquitin signature 55 75 IPR019956 -
Phco2g00018 937 PRINTS Ubiquitin signature 76 97 IPR019956 -
Phco2g00018 937 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Phco2g00018 937 SMART ubq_7 24 95 IPR000626 GO:0005515
Phco2g00018 937 MobiDBLite consensus disorder prediction 676 694 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 168 215 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 585 602 - -
Phco2g00018 937 Gene3D - 13 108 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 530 563 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 622 694 - -
Phco2g00018 937 SUPERFAMILY Ubiquitin-like 19 99 IPR029071 -
Phco2g00018 937 MobiDBLite consensus disorder prediction 490 513 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 708 723 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 92 122 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 92 131 - -
Phco2g00018 937 CDD Ubl_ubiquitin_like 26 93 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 447 471 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 441 513 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 585 604 - -
Phco2g00018 937 FunFam Large proline-rich protein BAG6 16 109 - -
Phco2g00018 937 MobiDBLite consensus disorder prediction 708 729 - -
Phco2g00018 937 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00018 Phco-Chr2 190317 199954 Transposed