Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00008 ATGGAGAAGGCAGGAGGAGGAGTACTATCGGCGAAGGAGGCATTCGAGAAGCTTGAAAAGGTTGGAGAAGGGACGTACGGAAAGGTGTACAGGGCAAGAGAAAAGGCCACTGGGAAGATCGTTGCCCTCAAGAAGACTCGCCTCCATGAGGACGAAGAAGGTGTCCCTCCCACCACCCTCCGCGAGGTTTCCATTCTGCGGATGCTCTCGCGCGATCCCCATGTCGTCAGGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGCAAGACAGTCCTCTACTTGGTATTTGAGTACATGGATACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAAACTGGAGAATCAATTCCACCTCAAACCATCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTCGCTTTCTGCCACGGCCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGGAAAACAATGATGCTTAAAATAGCTGATCTTGGACTCGCTCGAGCATTCACTGTACCAATTAAGAAATATACGCATGAGATACTTACCCTGTGGTATAGAGCCCCTGAAGTTCTTTTGGGAGCCACCCATTACTCAATGGCTGTGGATATATGGTCCGTCGCCTGCATATTTGCCGAACTTGTCACCAAGCAAGCACTCTTTCCTGGTGATTCCGAGCTTCAACAACTCCTTCATATATTCAGGCTGTTGGGCACTCCTAATGAAGAAGTGTGGCCAGGCGTGAGTAAACTAATGAACTGGCATGAATACCCCCAATGGAATCCTCAAAGTCTGTCAACGGCTGTTCCGAGTTTGGATGAGCTTGGAATCGATCTGCTATCTCAAATGTTGAAGTATGAACCTTCCAAGAGGATTTCTGCGAAGAAAGCAATGGAACACCCCTACTTTGATGACCTGGACAAGAGGCACCTTTAG 942 0.4809 MEKAGGGVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGESIPPQTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWNPQSLSTAVPSLDELGIDLLSQMLKYEPSKRISAKKAMEHPYFDDLDKRHL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00008 313 SUPERFAMILY Protein kinase-like (PK-like) 13 308 IPR011009 -
Phco2g00008 313 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Phco2g00008 313 PANTHER CELL DIVISION PROTEIN KINASE 13 306 - -
Phco2g00008 313 SMART serkin_6 15 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00008 313 ProSiteProfiles Protein kinase domain profile. 15 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00008 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Phco2g00008 313 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Phco2g00008 313 FunFam Cyclin-dependent kinase B2,2 11 101 - -
Phco2g00008 313 Pfam Protein kinase domain 15 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00008 313 Gene3D Transferase(Phosphotransferase) domain 1 103 312 - -
Phco2g00008 313 FunFam Cyclin-dependent kinase 2 103 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00008 Phco-Chr2 121767 123358 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Phco2g00008 Pkinase 2.4e-71 CL0016