Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g02054 ATGATTAGATTGGAACTCATACCGGTAGGAACAATTCTGGTTGTTCTAAGCAGCCAGTTCGTGAAAACATCTAATGCAGACATTGATGTTTTATTGATAAAGAATGTTTCAAAAGTCCTTTCAAAACAACTGCTTGATATTTCAAGGTCTCTGGCTGCATTGTCCGTTGCAAACAATAAACTCCTATCAAGAATTTCTGATCAGGTTGACAGACTACAGAACGAGATTGCAAAAGCTTGTGATTTCACTTTCACATGTGTGTATTTCATTGAATTATTTGACTATGGTGTATTTTCACAGTTCTCAATAGGGCAGAACTGGCGCAACGTCATAAGTATAATGGGCTTGGTGGCTGTTATGTGGACAAATTATCTAAGAAAGCGTCTTCCACTAACAATAAGGTCTCTTCATACCTTGAAAGGTAATCAATTAGACCAAATTTTAATGTCTCCACCTCTTGCATCTTTGGACCTTCCTGACATCTGGAGTCCTAATTCTTCATCTCGGATTATTCCAGCAATACATAAAAGCTTTGATGACCACACTACTATAGTGCTTGATGGAAAGTTGATATCCATGGAAATCAGATCAAGAATAGCTGCTAAGGTAAGAGAAATGAAGAAGTGCCTAGGAGAAGTTCCTGGATTAGCCGTAATTTTAGTAGGCCAAAGAAGGGATTCTCGAACTTATGTTCGCAACAAGATAATGGCTTGTGAAGAAGTTGGAATAAAGTCTGTGGTGACTGAATTACCCACTGACTGTGCAGAAATGGATGTTCAAAATGCGATCATGAGATTTAACAAAGATCCATCCATTCATGGTATTCTTGTGCAACTCCCTCTACCAGAACATCTAGATGAGGAAAAGGTTCTGGATGCTTTATGTATTGAGAAAGACGTCGATGGTTTTCATCCCGTTAATATGGGGAATCTTGCCATAAATGGAAAGGAGCCACTGTTTACTCCTTGTACTCCAAAGGGCTGCATTGAGTTATTGATCAGATCAGGAGTCGAGATAATGGGGAAGAAAGCCGTAGTGATAGGAAGAAGTAATATAGTTGGTTTGCCGACGTCCTTGTTATTGCAGAGACACCATGCAACAGTCACTGTTATACATGCCTTCACAGAAAACCCTGAACAGATCACCTCTGAAGCTGATATTATAGTTTCAGCTGCTGGAGTGCCTAATTTGGTCCGTGGTAACTGGATAAAACCTGGTGCAACTGTGATCGATGTTGGTACTACTCCTGTTGAGGATTCTGGCTGCGACGATGGTTATCGTCTCGTAGGTGACGTATGCCATGAAGAAGCCATAAAAATGGCATCTGTTATTACTCCCGTGCCTGGCGGGGTTGGGCCTATGACCGTTGCTATGCTACTATATAACACTCTAGTTTCTGCAAAACGCATGCTGAATTTTAATTGA 1425 0.4056 MIRLELIPVGTILVVLSSQFVKTSNADIDVLLIKNVSKVLSKQLLDISRSLAALSVANNKLLSRISDQVDRLQNEIAKACDFTFTCVYFIELFDYGVFSQFSIGQNWRNVISIMGLVAVMWTNYLRKRLPLTIRSLHTLKGNQLDQILMSPPLASLDLPDIWSPNSSSRIIPAIHKSFDDHTTIVLDGKLISMEIRSRIAAKVREMKKCLGEVPGLAVILVGQRRDSRTYVRNKIMACEEVGIKSVVTELPTDCAEMDVQNAIMRFNKDPSIHGILVQLPLPEHLDEEKVLDALCIEKDVDGFHPVNMGNLAINGKEPLFTPCTPKGCIELLIRSGVEIMGKKAVVIGRSNIVGLPTSLLLQRHHATVTVIHAFTENPEQITSEADIIVSAAGVPNLVRGNWIKPGATVIDVGTTPVEDSGCDDGYRLVGDVCHEEAIKMASVITPVPGGVGPMTVAMLLYNTLVSAKRMLNFN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g02054 474 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 186 301 IPR020630 GO:0004488
Phco1g02054 474 Gene3D Leucine Dehydrogenase, chain A, domain 1 188 464 - -
Phco1g02054 474 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 282 IPR000672 GO:0004488
Phco1g02054 474 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 386 415 IPR000672 GO:0004488
Phco1g02054 474 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 290 311 IPR000672 GO:0004488
Phco1g02054 474 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 337 357 IPR000672 GO:0004488
Phco1g02054 474 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 444 462 IPR000672 GO:0004488
Phco1g02054 474 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 214 236 IPR000672 GO:0004488
Phco1g02054 474 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 427 443 IPR000672 GO:0004488
Phco1g02054 474 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 183 468 - -
Phco1g02054 474 FunFam C-1-tetrahydrofolate synthase, cytoplasmic, putative 188 327 - -
Phco1g02054 474 Hamap Bifunctional protein FolD [folD]. 183 471 IPR000672 GO:0004488
Phco1g02054 474 Gene3D - 186 447 - -
Phco1g02054 474 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 304 469 IPR020631 GO:0004488
Phco1g02054 474 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 183 302 IPR046346 -
Phco1g02054 474 FunFam Bifunctional protein FolD 320 447 - -
Phco1g02054 474 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 303 468 IPR036291 -
Phco1g02054 474 CDD NAD_bind_m-THF_DH_Cyclohyd 296 468 IPR020631 GO:0004488
Phco1g02054 474 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 448 456 IPR020867 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g02054 Phco-Chr1 60206222 60210970 Dispersed