Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g02032 ATGGCTTCTCTGTTCCCTCCAACTCCAACTGCTACTTCCACGCTCAAACACAGCCAAATGGCTTCTCCATTGAAGCTCACCACACCAAACAATGCTTCTTTCTTGTGGAACTCAAGCCACCGTTTGAAGAGCAACTCTGCAAAGTGCCATGCACTGTTTGGTGACATGGCCAAAGGGTTGGTGGAGAACAGTGTTGGCATGGACCAGTTTCAAAGTATCCAATCAGGAATAGTGCAGTTTGAAAGAGTGACTGAAGGCTTATCTGACATGCAGAGGTGGGGGGTTCTCGTGTTTGGTGGGTTGACGTGGATTTACCTGACTGCGAGGCCTGGTGTGCTTGTTGGTGCCATTGATGCGTACCTTTTGGCCCCTCTTCAACTGGGGTTCGACAGTTTGGTTGGAAGGAGGAACCTGAAGAGGAGTGACTTTGTGGTTGGAGAAAAGCTTGGTGAAGGGTCTTTTGGTGTTGTCTATTCGGGTGTTTTGGTTCCAAAGAATGGGAATGGGAATGATGGGAGTCTTGATGTGGTGCAGAAGAGGGGGAGAGGCAAGGCAACGCAGGTGGAAGCCAAATCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTAGGAATTCAAGGCGCTGAGGAGTTTGGTGATTACGAGGAGTGGTTCAATTACAGGCTCTCTAGGGCAGCTCCCGAAACATGTGCTGACTTCCTGGGAAGTTTTGTAGCTGATCAAACAAATTCACAGTTTACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCGTACTCTTGCTGATTACATGAAGGATCGCAACTTTCCTTCAAACTTGGAATCTGTGATGTTTGGACGTGTCCTGCAAGGTGTTGACTCTTCAAAACGAAATGCATTGATCATCAAACAAATAATGCGGCAGATCATTACATCTCTGAGGAAAATTCATGATACTGGCATTGTTCACAGGGATGTAAAGCCAGCCAACTTAGTGGTTACTAAACGAGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGACTTGCGGATTGGAAAGAATTATGTTCCCAACCGTACCCTTTTGGATCCTGACTACTGCCCCCCAGAATTATATGTACTCCCAGAAGAAACACCAAGTCCACCACCAGAACCAATTGCTGCTTTCCTTTCTCCAATCCTTTGGCAGTTAAACAGCCCTGATTTGTTTGATATGTATTCAGCTGGAATTGTACTTCTTCAAATGGCAATACCATCTTTAAGGTCTTCAGCTGCTTTGAAGAATTTCAACTTGGAACTAAAAAACTGTGGATTTGATTTGAAAAAATGGAGGGACTATACTCGCAGCAGGCCTGACTTCCAAATTCTAGATAGTGAATCTGGTAGAGGGTGGGACTTAGCTACAAAGCTTGTATCTGAGAGAGGTTCCCTAAGAAGAGGACGTTTATCTGCTGCCGCAGCTCTGCGACATCCCTATTTTCTTCTGGGTGGTGATCAGGCAGCTGCAGTACTTTCAAAACTAAGCTTAAGCAGAAAGTGA 1530 0.451 MASLFPPTPTATSTLKHSQMASPLKLTTPNNASFLWNSSHRLKSNSAKCHALFGDMAKGLVENSVGMDQFQSIQSGIVQFERVTEGLSDMQRWGVLVFGGLTWIYLTARPGVLVGAIDAYLLAPLQLGFDSLVGRRNLKRSDFVVGEKLGEGSFGVVYSGVLVPKNGNGNDGSLDVVQKRGRGKATQVEAKSKDKVILKKVKVGIQGAEEFGDYEEWFNYRLSRAAPETCADFLGSFVADQTNSQFTKGGKWLVWKFEGDRTLADYMKDRNFPSNLESVMFGRVLQGVDSSKRNALIIKQIMRQIITSLRKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPSLRSSAALKNFNLELKNCGFDLKKWRDYTRSRPDFQILDSESGRGWDLATKLVSERGSLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSRK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g02032 509 SMART serkin_6 143 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g02032 509 MobiDBLite consensus disorder prediction 1 20 - -
Phco1g02032 509 SUPERFAMILY Protein kinase-like (PK-like) 139 491 IPR011009 -
Phco1g02032 509 Pfam Protein kinase domain 297 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g02032 509 ProSiteProfiles Protein kinase domain profile. 143 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g02032 509 Gene3D Phosphorylase Kinase; domain 1 131 257 - -
Phco1g02032 509 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 53 509 - -
Phco1g02032 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Phco1g02032 509 Gene3D Transferase(Phosphotransferase) domain 1 288 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g02032 Phco-Chr1 60097572 60100344 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Phco1g02032 Pkinase 3.6e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g02032 1 60097572 60100344 Phco3g02386 3 50445199 50449294 PCT