Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g02027 ATGATGGAGCCTTCACTCATACTCTCTTCACCTTCATCATCCACCCCTTTACCTTTCTTCATCTCAAACGCACTTCCTTTCCATGCAAAACCCAATCTTTCCGTCAAACTCAATTGCACCCTCCAAAAGTCCCATTTTTGGGGAAGAAATTTGAGTTGGGTCCCATCACAATTGCCGCATGGAAGATCGAAATTTGATGCGATGAGGCCCGTAATAACAGCGGCGGTGAAGAGAAGGAAAGAGCTTCCATTTGACAACGTGATTCAGAGGGACAAGAAGCTGAAATTCGTTCTGAGGGTGAGGAATATTCTGGTGGCTCAACCAGATAGGGTTATGTCGCTTAAGCAGCTTGGCAAGTTCAAAAGAGATTTGGGTCTTGATAAAAGGAGGAAACTTATTGCCATATTGAAGAAATTCCCAGCTGTGTTTCAGATTATGGAAGAAGGGGTTTACTCTCTTAAGTTCAAAATGACCCCTGAAGCTGAGAGACTCTATTTTGAGGAATTGAAGATTAGGAATGAGATGGAAGAGTTGGTGATTGTCAAGCTCAGGAAGTTGTTGATGATGTCTCTGGAAAAGCGGATTTTGTTGGAGAAAATTGCACATCTCAGGACTGATTTTGGTCTCCCGCAAGGATTTCGTGACACCATTTGTCATAGGTACCCTCAGTACTTCAAAGTGGTTGCAACTGAGCGTGGCCCTGCCTTGGAACTAACTCATTGGGACCCTGAGCTTGCAGTTTCAGCGGCTGAGCTATCGGCTGAGGATAATCGCATCAGGGAAATGGAGGAGCAGAATTTGATCATAGACAGACCTCTCAAGTTCCACAGGGTGAAGCTTCCTAAGGGTCTTAATCTTTCCAAGGGTGAGATGAGGAGGATTATGCAATTCAGAGACATGCCTTATATGTCGCCTTACTCTGATTTCACAAGACTGAGGCCAGGGACAAGGGAGAAGGAAAAACATGCTTGTGGAGTTGTTCATGAGATTCTGAGTCTCACACTTGAGAAGCGGACGCTTGTTGATCACTTCACACACTTTCGCGAGGAGTTCAGATTCTCTCAGCAGCTGAGGGGGATGTTGATAAGGCATCCTGATATGTTTTATGTCTCTCTGAAAGGAGATAGGGATTCTGTGTTTCTCAGGGAAGCTTATCGGGACTCTCAGTTGGTGGACAAGAATCGGTTGTTGCTTGTAAAGGAAAAGTTTCGTGTCCTGGTTAATGTTCCGCGATTCCCCAAGGGACCTGCTCGCAGAACCCTTGAAGATAGCTTGAGAGAAGGTGATGGCAGAGAAGATGAAAGTGATCAAGGGGAAGAAGCATGGTCAGAAGAAGTTGATAATTTAGTGAGTGGCGAAGAATTTGAGGATGTTGATGATGGTTATGATGGCTGGAGTGATGACGACGATGACAGTTTGCCACCAGATTTTGATGACGAAGCTGAAATATTGGAGATTGGACAAGGAAAGACAAATAAACAAGTTAAATACTCGAGACAGAATGATGAAGAGGTCCGTCTTCCTGTATTCTCTGACGGCCGTCCCAGAGAACAATGGTGA 1560 0.4487 MMEPSLILSSPSSSTPLPFFISNALPFHAKPNLSVKLNCTLQKSHFWGRNLSWVPSQLPHGRSKFDAMRPVITAAVKRRKELPFDNVIQRDKKLKFVLRVRNILVAQPDRVMSLKQLGKFKRDLGLDKRRKLIAILKKFPAVFQIMEEGVYSLKFKMTPEAERLYFEELKIRNEMEELVIVKLRKLLMMSLEKRILLEKIAHLRTDFGLPQGFRDTICHRYPQYFKVVATERGPALELTHWDPELAVSAAELSAEDNRIREMEEQNLIIDRPLKFHRVKLPKGLNLSKGEMRRIMQFRDMPYMSPYSDFTRLRPGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLVDKNRLLLVKEKFRVLVNVPRFPKGPARRTLEDSLREGDGREDESDQGEEAWSEEVDNLVSGEEFEDVDDGYDGWSDDDDDSLPPDFDDEAEILEIGQGKTNKQVKYSRQNDEEVRLPVFSDGRPREQW 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g02027 519 MobiDBLite consensus disorder prediction 417 432 - -
Phco1g02027 519 MobiDBLite consensus disorder prediction 417 519 - -
Phco1g02027 519 MobiDBLite consensus disorder prediction 496 519 - -
Phco1g02027 519 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 68 436 IPR045040 GO:0003723
Phco1g02027 519 Pfam Plant organelle RNA recognition domain 80 408 IPR021099 GO:0003723
Phco1g02027 519 Coils Coil 245 265 - -
Phco1g02027 519 MobiDBLite consensus disorder prediction 433 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g02027 Phco-Chr1 60073993 60075552 Dispersed