Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g02015 | ATGGGGAAAATTCCTCCTTCATTCCGCTCCGCAATTGGAAACCCTAACATTCGAAACCCTTCTTCTCTGTTCCGTCCTCAACCACCTTCTCCTCCCTCCAAACCATCCCCTTCCCTCAAGAAACAATCCCCAAAACCCATCCCAAAACCAAACCCTATCTTCAAATCCCCAAATCTCGAAGATGCCAAGAAAATCTTCGACTCCATTGCCAATTCCTCCAAAGACCCTCGCTTCCCCAATTCCGTCCTCCACTCCTACGCCAAAATCGCCGCCTCCACCACCGACTCCGTCAAATTCCTCCACCACATCACCAAAACCCTCCCTTCCTTTTCCCCCGATCGCTCCACCTTCCACATTCTCCTTTCCCACTCCTGCGCCAACCCCAATTCCAATTCCAATTCCAATTCCAATTCCGCTCTCTCCGCAATACACCAAACCCTAAATTCAATGCACGCCGCCGGCGTCACTCCGGATGCCGCCACGGCCGATGTTGCGATCCGCGCCTTGTGCTCTGCCGGTCACCTTGACCACGCCATTGAATTGATCAACGAATTCGCCTCCAAACACTGCCCTCCGGACACCTACACCTTCAATTTCCTTGTCAAGCACCTATGCAAAGCCCGCGCCCTGTCCAGTGTCTACGACTTCATCGACAAAATGCGCGAAAAATTCGGTGTAAAGCCTGATCTTGTTACCTACACTATATTGATTGACAATGTGTGTAATGGTAAGAACTTGAGAGAGGCAATGAGGTTGGTGAGTGTGCTTCATGAGGAAGGGTTCAAGCCTGATTGCTTTGTGTATAACACGATTATGAAAGGGTATTGTGTGCTGAGTAGAGGGAGTGAGGCGATTGAGGTTTATAACAAGATGAAGGAGGAAGGGGTGGAGCCTGATCTTGTTACTTACAACACTTTGATTTTTGGGTTGTCCAAGTCGGGGAGGGTGGTGGAGGCCAAGAAGCTGCTGCGTGTGATGGCGGAGAAGGGTTATTTTCCTGATGAGGTGACTTATACTACATTGATGAATGGGATGTGTAGGAAGGGGGAGGCGCTGGCGGCGCTGGCATTGTTGGGGGAGATGGAGGGGAAGGGGTGCAGCCCCAATGAATGCACATACAACACACTGCTGCACGGGTTGTGCAAGGCGAGGTTGTTGGATAAGGCAATTGAGTTCTATGGGGTGATCAAGGAGGGTGGTCTGAAGTTTGATACGGCTTCTTATGGGACATTTGTGAGGGCACTGTGTAGGGATGGGAGAGTTGCCGAGGCTTATGAGGTGTTTGATTATGCTGTTGAGAGCAAGAGCTTGAGTGATGTTGCTGCTTACTCGACGTTGGAGAGCACGCTTAAGTGGCTCAAGAAGGCTAAAGAACAAGGGCTTGCTGTTTAA | 1392 | 0.5043 | MGKIPPSFRSAIGNPNIRNPSSLFRPQPPSPPSKPSPSLKKQSPKPIPKPNPIFKSPNLEDAKKIFDSIANSSKDPRFPNSVLHSYAKIAASTTDSVKFLHHITKTLPSFSPDRSTFHILLSHSCANPNSNSNSNSNSALSAIHQTLNSMHAAGVTPDAATADVAIRALCSAGHLDHAIELINEFASKHCPPDTYTFNFLVKHLCKARALSSVYDFIDKMREKFGVKPDLVTYTILIDNVCNGKNLREAMRLVSVLHEEGFKPDCFVYNTIMKGYCVLSRGSEAIEVYNKMKEEGVEPDLVTYNTLIFGLSKSGRVVEAKKLLRVMAEKGYFPDEVTYTTLMNGMCRKGEALAALALLGEMEGKGCSPNECTYNTLLHGLCKARLLDKAIEFYGVIKEGGLKFDTASYGTFVRALCRDGRVAEAYEVFDYAVESKSLSDVAAYSTLESTLKWLKKAKEQGLAV | 463 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g02015 | 463 | Gene3D | Tetratricopeptide repeat domain | 53 | 256 | IPR011990 | GO:0005515 | |
| Phco1g02015 | 463 | Gene3D | Tetratricopeptide repeat domain | 328 | 462 | IPR011990 | GO:0005515 | |
| Phco1g02015 | 463 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 193 | 223 | IPR002885 | - | |
| Phco1g02015 | 463 | Pfam | PPR repeat family | 333 | 382 | IPR002885 | - | |
| Phco1g02015 | 463 | Pfam | PPR repeat family | 263 | 312 | IPR002885 | - | |
| Phco1g02015 | 463 | Pfam | PPR repeat family | 192 | 242 | IPR002885 | - | |
| Phco1g02015 | 463 | Gene3D | Tetratricopeptide repeat domain | 257 | 327 | IPR011990 | GO:0005515 | |
| Phco1g02015 | 463 | MobiDBLite | consensus disorder prediction | 22 | 53 | - | - | |
| Phco1g02015 | 463 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL | 223 | 449 | - | - | |
| Phco1g02015 | 463 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 334 | 368 | IPR002885 | - | |
| Phco1g02015 | 463 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 158 | 192 | IPR002885 | - | |
| Phco1g02015 | 463 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 404 | 438 | IPR002885 | - | |
| Phco1g02015 | 463 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Phco1g02015 | 463 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 264 | 298 | IPR002885 | - | |
| Phco1g02015 | 463 | NCBIfam | pentatricopeptide repeat | 407 | 435 | IPR002885 | - | |
| Phco1g02015 | 463 | NCBIfam | pentatricopeptide repeat | 301 | 335 | IPR002885 | - | |
| Phco1g02015 | 463 | NCBIfam | pentatricopeptide repeat | 371 | 404 | IPR002885 | - | |
| Phco1g02015 | 463 | NCBIfam | pentatricopeptide repeat | 166 | 194 | IPR002885 | - | |
| Phco1g02015 | 463 | NCBIfam | pentatricopeptide repeat | 267 | 299 | IPR002885 | - | |
| Phco1g02015 | 463 | NCBIfam | pentatricopeptide repeat | 336 | 370 | IPR002885 | - | |
| Phco1g02015 | 463 | NCBIfam | pentatricopeptide repeat | 231 | 265 | IPR002885 | - | |
| Phco1g02015 | 463 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 299 | 333 | IPR002885 | - | |
| Phco1g02015 | 463 | Pfam | PPR repeat | 166 | 188 | IPR002885 | - | |
| Phco1g02015 | 463 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 369 | 403 | IPR002885 | - | |
| Phco1g02015 | 463 | SUPERFAMILY | HCP-like | 245 | 459 | - | - | |
| Phco1g02015 | 463 | Pfam | PPR repeat | 400 | 430 | IPR002885 | - | |
| Phco1g02015 | 463 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 229 | 263 | IPR002885 | - |