Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01996 ATGGCGAAGGTTGAAAGCAGCATGGCTCGGGTGATTCTGGAGCCACACGCGCAGTTCGACCTCACCGCCCACTCACGCGCTAGTTCCATTCGATCGCTCGCACTCGCCACACTGCCGCACGCGCGACGGCACCGTGCTGCTGTCCTCTATGTCGGTACTCACTCGGGAACCCTCTTCTCCCTCTCCGTGGACACCGACGACGGTGACGGTGCCCCGAACGATGCCGTTCTGCGGAAGCTCTCGTTCCTGCGGAGCGTTTCGGTGAGCGACGCCGCAGTGGATTGCATTTCGGTGATCGAGGAGTTAGGGAAGGTTCTGTTGCTCTCCGATGGGGCTTTGTTCTTGGTGGACTCGGAGCTCTCGAATCGCGCTTCGAAATTGAGTTTCTCTAAGGGAGTATCGTTGGTCACGAGGAGGCGGTTCAGGAACGGCGAATCCGAGGGTGTGGGTTTGGGTTTGGGTTCGGGGCTAGGTTCGGGGTTAGGGTTGTTTCAGAAATTGAGAATGAACTCAGTGAAGGAGGGTGAAATGCAGAGTGAGGGTGGTTGTGTTTTTGCGCTTGTTGTTGGGAAGAGGTTGATTATTGCGGAGCTTGTCTTGGGGAATAGGAATGGGAAAAGTGAGAGGGATGATGGTGGTGGGGGCTCTCTTGTGGTTTTGAAGGAGATTCAGTGTGTGGATGGGGTTGTTAGTGCCATGGTGTGGCTTAATGATTCTATTGTTGTTGGTACTGTGAATGGGTATAGGTTGATTTCCTGTGTAACTGGGCAGAGCAGTGTGATCTTCTCGCTGCCGGATGTGTCGCGGCCGCCAAGGTTGAAGCTTTTGCACAAGGAGTGGAGGGTGCTGTTGTTGGTGGACAATGTGGGGGTTATTGTTGACGCACATGGGCAGCCAGTGGGAGGGAGTCTGGTGTTCCGGAATGGGTTGGATTCGGTTGGAGAGATTGGTTCTTATGTGGTTGTGGTGAGTGAGGGGAAGATTGAGTTGTATCATAAGAGGTATGGTGGCTGTGTTCAGGTTTTGCCGTTTGGTGGGGAAGGAGTTGGGCGATGTGTTGTTGCTAGTGAGGAAGATAGGGATGGGAAGCTTGTTGTTGTTGCCACTGCTACCAAGGTAGTGTGCTATCAGAAATTACCTTCTGTAGAACAAATAAAAGACCTTCTGAGGAAGAAGAACTATAAGGGAGCCATATCCTTGGTGGAGGAGCTTGAGTTAGAAGGGGAAATGTCAAAAGATTTGCTCTCGTTTGTTCATGCTCAAGTGGGATTCCTCTTGCTTTTTGACTTGCATTTTAAAGAAGCAGTGGACCACTTCTTGCTTTCTGACACTATGCAACCTTCTGAAGTATTCCCATTTATAATGCGTGATCCAAATCGATGGTCCTTACTGGTTCCTAGGAATAGGTATTGGGGTTTGCATCCTCCACCAGCCCCTCTTGAAGATGTTATAGATGATGGCTTGATGAGAATCCAAAGAGCTTCTTTTCTGAGGAAAGCAGGTGTAGAAACAATGGTAGATAATGATCTTTTTCTCAATCCAGCGAATAGAGCTGATTTGTTGAAGTCAGCAATCAAGAACATTAGTAGGTATTTGGAGGCCTGTCGAGAAAAAGACCTAGCAGAATCAGTCAGGGAGGGAGTTGACACTCTACTAATGTATCTCTATAGAGCTCTAAATTGTGTTGAAGACATGGAGAGGCTGGCATCTTTTACAAACTGGTGTGTTGTGGAGGAATTGGAACAGATGTTAGAAGAGTCTGGGCACCTACGAACACTTGCCTTCTTGTGTGCAAGTAAAGGAATGAGCTCAAAAGCTGTGCATATTTGGCGCATCCTAGCGAGAAATTATTCATCTGGCCTGTGGAAAGACCCTGCTTTGGAGAATAGCACGCAGGATAATAGGGAAAGCCTTATTTCTGGCAGGGCAATTGCTTCAGCTGAAGCTTCAAAGATTCTTGAGGAATCATCTGACCAAGAGTTGATTCTAGAACATTTAGGATGGATTGCAGATGTTAGCCAGGTTCTTGCAGTCAAAGTTTTAACTTCAGAGAAACGAGAGATCCAACTTTCTCCTGATGAAGTTGTTACAACCATTGATCCACAAAAGGTAGAAATTTTACAGAGGTATCTCCAGTGGTTGATTGAAGACCAGGACTGTAATGATACACAGTTGCATACGTTGTATGCTCTCTCACTTGCCAAATCAGCAATTGAAGTCATTGAATCTGAAAATATCTGTGAGAATCTTAATGGTGAAAGTATAGAGACAAGAAGTTTGGCTGCTTTGAAGAACTCAATCTTTGACATTCCTGTCAGGGAAAGATTGCAGATATTTTTGCAATCCTCAGACTTGTATGATCCAGAAGAAGTTCTTTATTTGATTGAAGGATCAGAATTGTGGTTAGAGAAGGCTATTCTGTATAGAAGACTGGGGCAGGAGACTTTGGTCCTCCAAATTTTGGCTTTGAAACTAGAAGACAGTGAAGCTGCTGAGCAGTATTGTGCTGAGATAGGAAGGGCTGATGCTTATATGCAGTTGCTTGAAATGTATCTGGACCCACAAGATGGGAAGGATCCCATGTTTACTGCTGCTGTTCGCCTACTCCATAATCATGGAGAATCATTAGACCCGTTGCAAGTTTTAGAGAAACTATCTCCAGATATGCCACTTCAACTTGCTTCTGATACTTTACTAAGAATGTTCAGGGCCAGAGTTCATCATCATCGTCAAGGCCAGATTGTGCATAATTTATCACGTGCTGTGGACATTGATGCAAGATTATCAAGATTAGAGGAGAGGTCAAGGCATGTGCAAATTGATGATGAGAGTCTCTGTGATTCCTGTTATGCACGCCTTGGTACGAAGCTATTTGCAATGTATCCTGATGACACTGTTGTATGTTACAAGTGTTACCGTCGTCAAGGTGAGTCAGTGTCTGTCTCAGGCCGTAATTTTAAGGAAGACATCCTATTTAAACCAGGTTGTCTCGTGAGTAGATGA 3003 0.4612 MAKVESSMARVILEPHAQFDLTAHSRASSIRSLALATLPHARRHRAAVLYVGTHSGTLFSLSVDTDDGDGAPNDAVLRKLSFLRSVSVSDAAVDCISVIEELGKVLLLSDGALFLVDSELSNRASKLSFSKGVSLVTRRRFRNGESEGVGLGLGSGLGSGLGLFQKLRMNSVKEGEMQSEGGCVFALVVGKRLIIAELVLGNRNGKSERDDGGGGSLVVLKEIQCVDGVVSAMVWLNDSIVVGTVNGYRLISCVTGQSSVIFSLPDVSRPPRLKLLHKEWRVLLLVDNVGVIVDAHGQPVGGSLVFRNGLDSVGEIGSYVVVVSEGKIELYHKRYGGCVQVLPFGGEGVGRCVVASEEDRDGKLVVVATATKVVCYQKLPSVEQIKDLLRKKNYKGAISLVEELELEGEMSKDLLSFVHAQVGFLLLFDLHFKEAVDHFLLSDTMQPSEVFPFIMRDPNRWSLLVPRNRYWGLHPPPAPLEDVIDDGLMRIQRASFLRKAGVETMVDNDLFLNPANRADLLKSAIKNISRYLEACREKDLAESVREGVDTLLMYLYRALNCVEDMERLASFTNWCVVEELEQMLEESGHLRTLAFLCASKGMSSKAVHIWRILARNYSSGLWKDPALENSTQDNRESLISGRAIASAEASKILEESSDQELILEHLGWIADVSQVLAVKVLTSEKREIQLSPDEVVTTIDPQKVEILQRYLQWLIEDQDCNDTQLHTLYALSLAKSAIEVIESENICENLNGESIETRSLAALKNSIFDIPVRERLQIFLQSSDLYDPEEVLYLIEGSELWLEKAILYRRLGQETLVLQILALKLEDSEAAEQYCAEIGRADAYMQLLEMYLDPQDGKDPMFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLASDTLLRMFRARVHHHRQGQIVHNLSRAVDIDARLSRLEERSRHVQIDDESLCDSCYARLGTKLFAMYPDDTVVCYKCYRRQGESVSVSGRNFKEDILFKPGCLVSR 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01996 1000 Pfam Vacuolar sorting protein 39 domain 1 548 622 IPR019452 -
Phco1g01996 1000 Pfam Vacuolar sorting protein 39 domain 2 866 973 IPR019453 -
Phco1g01996 1000 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 48 385 IPR011047 -
Phco1g01996 1000 ProSiteProfiles Citron homology (CNH) domain profile. 27 357 IPR001180 -
Phco1g01996 1000 PANTHER CNH DOMAIN CONTAINING 33 977 IPR032914 GO:0016192