Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01992 ATGGAAATTGATAGCAGGTTTTTGAGCACTGGGCTCCTCCTAGTTGCCACAATTATTGTGGCAAAACTCATTTCAGCCTTCATAGTGCCCAAATCCAGGAAGAGGGTGCCCCCATTTGTGAAGGGGTGGCCCTTGGTTGGAGGGCTTGTCCGTTTCCTCAAAGGTCCAATCTTTATGCTCCGTGAGGAGTACCCTAAGCTTGGGAGTGTCTTCACCCTCAAACTCTTCCACAAGAACATCACTTTCCTCATTGGCCCTGAGGTCTCTGCACACTTCTTCAAGGCTCCGGAGACTGATCTCAGCCAGCAAGAGGTGTACCAGTTCAATGTGCCAACTTTTGGACCTGGGGTGGTTTTTGATGTTGACTACTCCGTGAGACAGGAACAATTCAGGTTCTTCACTGAGGCTCTTAGGGTCAACAAGCTTAAGAGCTATGTCAATCAGATGGTTGCAGAAGCAGAGGACTATTTCTCAAAGTGGGGACCAAGTGGTGAGGTTGATTTGAAGTATGAGCTTGAGCATCTTATCATCTTGACAGCTAGTAGATGTCTCTTGGGGCGTGAAGTTCGGGACAAGCTCTTTGATGATGTCTCTGCATTGTTCCATGATCTTGATAATGGGATGCTTCCAATCAGTGTGCTCTTCCCATACCTGCCTATCCCAGCTCATAAGCGCCGTGATCAGGCACGCAAGAAGCTAGCTGAAATCTTTGCAACCATCATATCTTCTCGCAAGAGTGCTGGCAAATCAGAAGATGACATGCTGCAGTGCTTCATCGACTCAAAATACAAAGATGGTCGCCCAACAACTGAAGCTGAAGTGACTGGACTCCTCATTGCTGCTCTTTTTGCGGGTCAACACACAAGTTCAATTACCTCCACTTGGACTGGTGCATATCTGCTATGTAACAACCAGTACCTTTCAGCTGTGCAGGAGGAGCAGAAGCAGTTGATGGAAAAGCATGGGGACAGAGTTGATCATGATGTTTTGGCTGAAATGGATGTGTTGTATCGGTGCATCAAAGAAGCCTTGAGACTCCACCCTCCTCTGATCATGCTGCTGAGAAGTTCACACAGTGATTTTAGTGTCACAACACGAGAGGGGAAAGAGTATGACATTCCCAAAGGTCATATAATTGCTACATCACCTGCTTTTGCTAACAGGCTAGATCACATTTTCAAGGACCCTGAAAGGTATGATCCTGATAGATTTTCTGTGGGGAGGGAAGAGGACAAGGTGGCTGGTGCATTCTCATACATTTCGTTTGGAGGGGGTAGACATGGATGCCTTGGGGAGCCATTTGCATATCTGCAGATTAAAGCAATATGGACTCATCTGCTGAGGAATTTTGAACTGGAGTTGGTGTCACCTTTTCCTGAGATCGACTGGAATGCCATGGTTGTGGGAGTGAAGGGAAAAGTGATGGTTCGATATAAGCGGAAGGTGCTTTCAGTTAATCAATAG 1464 0.4672 MEIDSRFLSTGLLLVATIIVAKLISAFIVPKSRKRVPPFVKGWPLVGGLVRFLKGPIFMLREEYPKLGSVFTLKLFHKNITFLIGPEVSAHFFKAPETDLSQQEVYQFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRVNKLKSYVNQMVAEAEDYFSKWGPSGEVDLKYELEHLIILTASRCLLGREVRDKLFDDVSALFHDLDNGMLPISVLFPYLPIPAHKRRDQARKKLAEIFATIISSRKSAGKSEDDMLQCFIDSKYKDGRPTTEAEVTGLLIAALFAGQHTSSITSTWTGAYLLCNNQYLSAVQEEQKQLMEKHGDRVDHDVLAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFSVTTREGKEYDIPKGHIIATSPAFANRLDHIFKDPERYDPDRFSVGREEDKVAGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFELELVSPFPEIDWNAMVVGVKGKVMVRYKRKVLSVNQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01992 487 Pfam Cytochrome P450 37 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS E-class P450 group IV signature 413 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS E-class P450 group IV signature 58 81 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS E-class P450 group IV signature 275 301 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS E-class P450 group IV signature 371 385 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 CDD CYP51-like 64 464 - -
Phco1g01992 487 SUPERFAMILY Cytochrome P450 32 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 FunFam Cytochrome p450 51g1 33 485 - -
Phco1g01992 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Phco1g01992 487 Gene3D Cytochrome P450 32 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco1g01992 487 PANTHER CYTOCHROME P450 FAMILY 7 16 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01992 Phco-Chr1 59623001 59625542 Transposed