Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01942 ATGGTCATGGCGGAATGCGAATTGGAACTCGAAGAGAAATCGTGGCATCTCCTCGCGCTCCTCCTCCGAATCGGCCACACAGTCTATCCGCAGCGCCTTGCCGCGGAGTGCCGTTTATTCGCCGCCTCGCCGGACTTTGTCTGCTACATCAGTTCTCTCCCCGGTTCACCGCTCTCTATCACGGACAACGGACTTGTCACGCCCTCTCTTAGTGCCGTCTTCGCCCTCGGAAGCTTCTTCTCTCTCCGTCTCTCTCCTGAACCGCAAACGAACCGTTCCAGGAAACGGAAGTTGCTATTTGACTTGGCGGAAGATGGAGTAGAACACAAGAGGTTCGCGATTGGGAACGGAATTCGGGAGTTGTCGTTCCAGAGTTTTGCTGGTGCTGCAGAGGCTCTGATGAGAAGAAATTTCCCTGTCCTAAAATTTGAATCTCAGAATATAGGTAGCGGGAATTTTGTATTCCCCTTGCGTGTTGATAAAAATGAAAAGTGTTCAGGTTGTCTAATGCCAAATATTAAACATAGGCAAGCCAATAATGATCCCAGTCAAACCATGTGTAATGAAGAGGTTTCTAAATCAATCATCAATGACTTAAACGACGGTCCAAAACTAGCGGACATATATAGATTCATGGCATGTAATCTCCGTGTTGACCGTGCTCTCTTAGATCCCTCAATATGCAAAAACGGCATCGATGCTAGTAGCCTTGGATTCGGGAAGAAAATGGATTTTGACACATTTACGCATGACTGTACTGAACTAAACAGCACTCATCATGTGGAAGAAGATGGTACGGGTGAAAGCAATGCTTGCAAAAATCTACCAGGAAAACCTAATGAAGATGAGGTGCAAAGTGGTTCAAAGAAGGGGCTGATCGATGCTGGCACAGATAGAGACAAGGAAGATGTTACTCAGATGGTCAATGCTGCACTCTGTGGAGAAGGATTGACTAATGGTTTGAAACAAAAAAACCCTGCCCATGCAATAAGTTTGGAAAAAATGGAGAGTGAGAGAAACACAATAACTTATAAAATAGCTAATTCCTCTTCAAATCCCAAGCGGCTTTTGAAATCTTCTAGCACATTAAAGGGGGGACAGAAGAATGAACTGCACCCTAAGTCACAAATTCTTAAAGAGTCACTAGCCAGCAATAAATGTAATGTTCCAAGAAATTTTGATCAATGTAAAAATGATCAGAAACTTACAACGAGGAAGCAAAATCATAAAGAGAACATGGCAGAAAATATTTCCGCTACTACTAAGGTGGAGAAAAAAGCATATCCATCATTTGAAGCGTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATAGTAATGCTCATAAAAACCACGTAACTACTGAACGGAATATGCTCGAGCGTTTTGGTGGTAAAAACTTCATAATAAGGTATGAAGGTTCTTTAAAAAATGGCAACACCGACTGCTTTGTTTTAGAGCATGTTGAGCATGAGAGACCTGAGGTTTTGAAAAAAGAAATTGATATAGTCCAGCTTCAATGGTACGGGTACTGCTTGTTCAAGGCCCTTTATTGCTTGCACAAAGAGGGAGTTGTTCACAGAGACGTTAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTAAGCAGAGGCTACCTTATTGATTTCAACCTTGCCATGGATTTAAAGCAGAAGAACAACGTTGGAAGTAAATCAAAACCAAGCCTGGTTGCATCATCGCATAATGTTTCTCTCTCTTCTCGTACTGCCCCTTTGGTCCGAGGCAAGAACCTTGGAGGCAGCAAGTCTTTAACATCCAATAAAAGGGCTTTGGCGGATTATAAAAATTATTCCGAACTTAATAGGCATGTAAAGCAAAAGGCTCATACTGGTCCTCTGAAAAATGGTCCCGACATGGTTGGTGGGAGTTTACTTAGAGCACAAGGAACAGACGGCTCTGGCATAACTTCTGCCAGAGATGCTAGCACTAAGACTGCTTCTGCAGAGAGGCTCAGGGAACCTTTACCTTCCCACGGAAGAAAGGAGCTTATCAGCTTTGTGAATACTATGAAATGTGCAAACAACAGTTCAATAATAGGTCCTTCTTCTCAAAGGAAAAGGGTCACTGCTCCCTCAAGCAGGGTAGATGGCAAGATTTTTCATATTACCCCGATGCCTATGCATTCATCTACTGTTGGTGCAGGATTATTGAGAGGCAAAGGAGACGGAAAACAGAAAAAAGAAGGTTCATGTGTTGGAACCAAAGGATTCCGTGCACCGGAGGTTTTATTAAGATCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGTGTCACTCTACTCTACATTGTGATCGGGAAGACTCCTTTCACTGGCGACCCGGAACAGAACATAAAAGAAATTGTTAAATTGCGAGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAAGTGTCTTTTCCTGTGGAGTTACTTGATGAGCGATACTTGCAGTCATGGGACTTGGAAGCGTGGTGCAAAACTCACTCAAAGAGACCAGAATTTCTTGATAAGATCCCGAAATCGTTGTTTGATTTGATAGACAAGTGTCTAACGGTTAATCCAAGAAATAGACTTAGTGCCGAAGATGTTCTAAGACATCAATTCTTTGACTCAATTAACGAGTCTCTGAGGAAGCAAAGGATGATGCATCGAGCTATTAGATCCGAGGCTGGAGCTTCTGCTGCAATCTGA 2790 0.4319 MVMAECELELEEKSWHLLALLLRIGHTVYPQRLAAECRLFAASPDFVCYISSLPGSPLSITDNGLVTPSLSAVFALGSFFSLRLSPEPQTNRSRKRKLLFDLAEDGVEHKRFAIGNGIRELSFQSFAGAAEALMRRNFPVLKFESQNIGSGNFVFPLRVDKNEKCSGCLMPNIKHRQANNDPSQTMCNEEVSKSIINDLNDGPKLADIYRFMACNLRVDRALLDPSICKNGIDASSLGFGKKMDFDTFTHDCTELNSTHHVEEDGTGESNACKNLPGKPNEDEVQSGSKKGLIDAGTDRDKEDVTQMVNAALCGEGLTNGLKQKNPAHAISLEKMESERNTITYKIANSSSNPKRLLKSSSTLKGGQKNELHPKSQILKESLASNKCNVPRNFDQCKNDQKLTTRKQNHKENMAENISATTKVEKKAYPSFEAFTIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHSNAHKNHVTTERNMLERFGGKNFIIRYEGSLKNGNTDCFVLEHVEHERPEVLKKEIDIVQLQWYGYCLFKALYCLHKEGVVHRDVKPGNFLFSRKLSRGYLIDFNLAMDLKQKNNVGSKSKPSLVASSHNVSLSSRTAPLVRGKNLGGSKSLTSNKRALADYKNYSELNRHVKQKAHTGPLKNGPDMVGGSLLRAQGTDGSGITSARDASTKTASAERLREPLPSHGRKELISFVNTMKCANNSSIIGPSSQRKRVTAPSSRVDGKIFHITPMPMHSSTVGAGLLRGKGDGKQKKEGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYIVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDREVSFPVELLDERYLQSWDLEAWCKTHSKRPEFLDKIPKSLFDLIDKCLTVNPRNRLSAEDVLRHQFFDSINESLRKQRMMHRAIRSEAGASAAI 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01942 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Phco1g01942 929 MobiDBLite consensus disorder prediction 348 369 - -
Phco1g01942 929 SMART serkin_6 434 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01942 929 SUPERFAMILY Protein kinase-like (PK-like) 418 907 IPR011009 -
Phco1g01942 929 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 376 912 - -
Phco1g01942 929 MobiDBLite consensus disorder prediction 348 372 - -
Phco1g01942 929 MobiDBLite consensus disorder prediction 663 678 - -
Phco1g01942 929 Pfam Protein kinase domain 436 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01942 929 Pfam Protein kinase domain 761 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01942 929 MobiDBLite consensus disorder prediction 639 684 - -
Phco1g01942 929 FunFam Probable serine/threonine-protein kinase DDB_G0291918 426 593 - -
Phco1g01942 929 FunFam Kinase like protein 743 913 - -
Phco1g01942 929 MobiDBLite consensus disorder prediction 283 301 - -
Phco1g01942 929 MobiDBLite consensus disorder prediction 259 301 - -
Phco1g01942 929 Gene3D Transferase(Phosphotransferase) domain 1 396 593 - -
Phco1g01942 929 ProSiteProfiles Protein kinase domain profile. 434 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01942 929 Gene3D Transferase(Phosphotransferase) domain 1 745 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01942 Phco-Chr1 59056430 59065120 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Phco1g01942 Pkinase 8e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01942 1 59056430 59065120 Phco1g01942 1 59056430 59065120 ECH