Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g01937 | ATGGCAGCAACTACAGAGGTTGAGAAGAACAATCTAGAAGAGGAAGCAGAACAAGTCGTGAATCCATGGGAGGTTTCTTCAAAAGGCAAAATCGATTACGACAAACTCATTGACCGTTTCGGTTGTCAGAAGCTCGACGACGCTCTCATTTCGCGTATCGAACGCCTCACCTCGCGCACTCCTCACGTTTTTCTACGACGCCGCGTTTTCTTCGCCCACCGCGATTTCGCCGAGATTCTGGATGCGTACGAGAGAGGCGATAAGTTTTACTTGTACACCGGACGCGGACCTTCCTCCGAAGCGTTGCACTTGGGACATTTGATTCCCTTCATGTTCACTAAGTATTTGCAAGATGTGTTTAAGGTTCCTCTGGTTATACAGCTCACTGATGATGAAAAGTTCTTCTGGAAAAATCTTACTGTAGAGGAATGCCGAAGACTTGCAAGGGAGAATGCAAAGGACATCATTGCTTGTGGTTTTGACATTTCAAAGACGTTCATCTTCTCTGATTTTAATTATGTTGGCGGTTCCTTCTACAAGAACATGTGTGAGGTTGCAACACGTGTAACTTATAACCAGGCTGTTGGCATCTTTGGGTTTGCTGGGGAAGATCATATTGGAAAAGTTAGTTTTCCTCCTGTGCAGGCCGTTCCATCATTTCCCAGTTCATTTCCTCACCTATTTTCTGGAAAAGAGAATCTCCGCTGTTTAATTCCTTGTGCAATTGACCAGGATCCATATTTTAGAATGACACGTGATGTTGCTCCTCGAATGGGTTTCAACAAGCCAGCCTTGATTGAATCAATATTCTTCCCTGCATTACAGGGGGAAACAGGAAAAATGTCTGCCAGTGATCCCAATTCTGCCATATATGTGACTGATTCCGCAAAAGATATAAAGAACAAGGTAAACAAGCATGCATTTTCGGGTGGGCAAGATTCTATTGAGAAGCATAGGCAATTGGGGGCAAATCTTGAGGTAGATATACCAATCAAATACCTATCTTTTTTCTTAGAAGATGATGCTGAACTTGAACACATTAAGAAGGAATATGGAGAAGGGCGCATGCTAACTGGTGAGGTAAAGCAACGGCTAGTTCAAGTCTTGACTGAAGTAGTGGAGAGACATCGTAGGGCTCGGGCTTCTGTGACTGAAGAGATGGTGGATGCATTTATGGCTGTCAGACCACTTCCCCACATGTTTGACTGA | 1209 | 0.4417 | MAATTEVEKNNLEEEAEQVVNPWEVSSKGKIDYDKLIDRFGCQKLDDALISRIERLTSRTPHVFLRRRVFFAHRDFAEILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDVFKVPLVIQLTDDEKFFWKNLTVEECRRLARENAKDIIACGFDISKTFIFSDFNYVGGSFYKNMCEVATRVTYNQAVGIFGFAGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKENLRCLIPCAIDQDPYFRMTRDVAPRMGFNKPALIESIFFPALQGETGKMSASDPNSAIYVTDSAKDIKNKVNKHAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDAELEHIKKEYGEGRMLTGEVKQRLVQVLTEVVERHRRARASVTEEMVDAFMAVRPLPHMFD | 402 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g01937 | 402 | ProSitePatterns | Aminoacyl-transfer RNA synthetases class-I signature. | 97 | 107 | IPR001412 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Phco1g01937 | 402 | NCBIfam | tryptophan--tRNA ligase | 88 | 393 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Phco1g01937 | 402 | Gene3D | HUPs | 8 | 283 | IPR014729 | - | |
| Phco1g01937 | 402 | SUPERFAMILY | Nucleotidylyl transferase | 17 | 395 | - | - | |
| Phco1g01937 | 402 | FunFam | Tryptophan--tRNA ligase, cytoplasmic | 285 | 402 | - | - | |
| Phco1g01937 | 402 | Gene3D | - | 284 | 401 | - | - | |
| Phco1g01937 | 402 | PRINTS | Tryptophanyl-tRNA synthetase signature | 236 | 257 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Phco1g01937 | 402 | PRINTS | Tryptophanyl-tRNA synthetase signature | 280 | 290 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Phco1g01937 | 402 | PRINTS | Tryptophanyl-tRNA synthetase signature | 102 | 118 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Phco1g01937 | 402 | PRINTS | Tryptophanyl-tRNA synthetase signature | 154 | 173 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Phco1g01937 | 402 | PANTHER | TRYPTOPHANYL-TRNA SYNTHETASE | 8 | 398 | - | - | |
| Phco1g01937 | 402 | CDD | TrpRS_core | 90 | 371 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Phco1g01937 | 402 | Pfam | tRNA synthetases class I (W and Y) | 87 | 372 | IPR002305 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Phco1g01937 | 402 | FunFam | tryptophan--tRNA ligase, cytoplasmic | 13 | 284 | - | - |