Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01914 ATGCATCAAAAATCCGAACTTCAGATCGGAAAAGAAAGCACCGGTGTCTCTTCCGATTTCAACCCTCTCCGCCACCATCCCAACCACCACCACCACCACCATCACCACCCTATCCCCAACCTCAACCTCCAAACCCTAACCTCAACCGCGCCCTATAAAAGGCCATCCCTCTCCAAATCCCCAACCCTCCACAGATTTCCAAAACCGCGCCGTGCCACCCCTCCCTCCGTCACCACCGCCACTTGGCTATCCTCCGTCGTCTCCCTCCGGCGACGGCTACGCCTCTTTCTCTTCCTCTCCCTCCCATTCTTCTACTTCCTCGTCTCCCACCCTACAAACTCCTTCCTCCTTGATTTCCTCTCCGCGTTCTTCTTCTCCGCCGCGCTCTTCTTCTCGCTCAGCCTCGCGCTGCCGCGGATCCCCTCCGTCCGTTTCTTCCTCAAGCGCGAGGCCCGGCCCCGGCCCCGGCCCCGGCCCGGCCAGCCCGAGTTTCAATTCTGCGTGGTTGCGTACCCGAACGGCGACGTTTACGAGGGGGAGTTCAGGCGAGGAAAGTGTTGTGGGAGTGGAGTTTACTACTACAGCATGAGTGGGAGGTATGAGGGGGATTGGGTGGAGGGGAAGTACGATGGGTTTGGGGTGGAGACGTGGGCGAGGGGGAGTAGGTACCGGGGGCAGTACCGCCAGGGGCTCCGTCATGGGTTCGGAGTGTACCGGTTTTACACCGGCGATGTTTATGCCGGAGAGTGGGCCAGTGGGCACAGCCATGGCTGTGGGGTTCACACGTGCGAGGATGGGAGCAGGTACGTGGGGGAGTTCAAGTGGGGCGTTAAGCATGGCCTTGGACAGTACCATTTTAGAAATGGGGATACATATGCTGGTGAATATTTTGCGGATAAGGTGCATGGATATGGAGTGTATAGTTTTGCAAATGGCCATTGTTATGAAGGATCCTGGCATGAAGGCAAAAGGCAAGGTATTGGAATGTATATATTTAGAAATGGAGAAACCCAGTCTGGTCATTGGCAAAATGGAGTCATTGACATCCCCAGCACACAGAGTGCTACCTTTCCTGTTTCTCCTGTTGGTGTGTATCATTCCAGAGTACTAAATGTAGTGCAGGAAGCAAGAAGAGCAGCTAAGAAGGCCTATGATGTGGCCAAGGTAGATGAAAGGGTGAATAGAGCAGTAGCAGCCGCTAACAGAGCAGCCAATGCAGCAAGAGTAGCTTCTGTCAAGGCTGTGCAAAATCAAATGCATCGTAATGTTAACAGCAAGAGCATCCCAATACCATTTGTGTGA 1302 0.5438 MHQKSELQIGKESTGVSSDFNPLRHHPNHHHHHHHHPIPNLNLQTLTSTAPYKRPSLSKSPTLHRFPKPRRATPPSVTTATWLSSVVSLRRRLRLFLFLSLPFFYFLVSHPTNSFLLDFLSAFFFSAALFFSLSLALPRIPSVRFFLKREARPRPRPRPGQPEFQFCVVAYPNGDVYEGEFRRGKCCGSGVYYYSMSGRYEGDWVEGKYDGFGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWASGHSHGCGVHTCEDGSRYVGEFKWGVKHGLGQYHFRNGDTYAGEYFADKVHGYGVYSFANGHCYEGSWHEGKRQGIGMYIFRNGETQSGHWQNGVIDIPSTQSATFPVSPVGVYHSRVLNVVQEARRAAKKAYDVAKVDERVNRAVAAANRAANAARVASVKAVQNQMHRNVNSKSIPIPFV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01914 433 Gene3D - 252 297 - -
Phco1g01914 433 Gene3D - 202 251 - -
Phco1g01914 433 Gene3D - 298 362 - -
Phco1g01914 433 MobiDBLite consensus disorder prediction 54 76 - -
Phco1g01914 433 SMART morn 175 196 IPR003409 -
Phco1g01914 433 SMART morn 221 242 IPR003409 -
Phco1g01914 433 SMART morn 198 219 IPR003409 -
Phco1g01914 433 SMART morn 267 288 IPR003409 -
Phco1g01914 433 SMART morn 290 311 IPR003409 -
Phco1g01914 433 SMART morn 244 265 IPR003409 -
Phco1g01914 433 SMART morn 313 334 IPR003409 -
Phco1g01914 433 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 252 297 - -
Phco1g01914 433 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 243 345 - -
Phco1g01914 433 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 167 388 - -
Phco1g01914 433 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 206 251 - -
Phco1g01914 433 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 171 276 - -
Phco1g01914 433 Pfam MORN repeat 177 197 IPR003409 -
Phco1g01914 433 Pfam MORN repeat 292 313 IPR003409 -
Phco1g01914 433 Pfam MORN repeat 246 268 IPR003409 -
Phco1g01914 433 Pfam MORN repeat 200 222 IPR003409 -
Phco1g01914 433 Pfam MORN repeat 315 336 IPR003409 -
Phco1g01914 433 Pfam MORN repeat 269 291 IPR003409 -
Phco1g01914 433 Pfam MORN repeat 223 245 IPR003409 -
Phco1g01914 433 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 298 343 - -
Phco1g01914 433 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01914 Phco-Chr1 58813197 58819230 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01914 1 58813197 58819230 Phco3g01772 3 40109764 40116873 PCT