Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01910 ATGAAATCGAGTTTTTGCACCCTCACTAGAATCAAGTTTTTGTCTCCCTCACTAGAATCGAGTTTTCATCACTGCAAATTGTCACTATCAGCAGGACTGCAAATCCTCAACTTCATTGTCAGTTGTCCAAACATTGAGAGGGTTAGTTTCTGCCTCAACCCAGACGTAGCCATGGGAAGAAGACCAGCGAGGTGTTATCGTCAAATTAAGAACAAGCCCTACCCGAAATCGCGGTTTTGCCGTGGTGTTCCTGATCCTAAGATCAGGATTTATGATGTTGGCATGAAGAAGAAAGGTGTTGATGAATTTCCCTTCTGTGTGCATTTGGTTAGTTGGGAGAAGGAGAATGTTTCAAGTGAGGCCCTGGAGGCTGCTAGGATTGCTTGTAACAAGTACATGGCAAAATTTGCTGGGAAGGATGCATTCCACTTGAGGGTTAGGGTGCATCCCTTCCATGTTCTTAGGATCAACAAGATGCTTTCGTGTGCTGGAGCCGATCGGCTTCAAACCGGCATGAGAGGTGCCTTTGGAAAGCCACAGGGTACTTGTGCTAGAGTGGCTATTGGTCAGGTCCTGCTCTCTGTCCGCTGCAAGGACAGCAACAGCCATCATGCGCAAGAGGCCCTCCGCCGGGCTAAATTCAAGTTCCCCGGCCGCCAAAAGATTATAGTTAGCAGGAAGTGGGGGTTCACCAAGTTTAACCGCACTGACTATTTGAAGTTCAAGTCAGAGAACAGGATTATGGCTGATGGTGTTAATGCCAAGCTTCTTGGGTGCCATGGACCACTGGCTAATCGCCAACCAGGAAGAGCCTTTTTGTCCAGTGCTACTGCCTAG 837 0.4803 MKSSFCTLTRIKFLSPSLESSFHHCKLSLSAGLQILNFIVSCPNIERVSFCLNPDVAMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYLKFKSENRIMADGVNAKLLGCHGPLANRQPGRAFLSSATA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01910 278 Gene3D Ribosomal protein L10e/L16 58 274 IPR036920 GO:0003735|GO:0005840|GO:0006412
Phco1g01910 278 NCBIfam 50S ribosomal protein L16 58 231 IPR001197 GO:0003735|GO:0005840|GO:0006412
Phco1g01910 278 ProSitePatterns Ribosomal protein L10e signature. 165 186 IPR018255 GO:0003735|GO:0005840|GO:0006412
Phco1g01910 278 PANTHER 60S RIBOSOMAL PROTEIN L10 58 270 IPR001197 GO:0003735|GO:0005840|GO:0006412
Phco1g01910 278 Pfam Ribosomal protein L16p/L10e 69 223 IPR016180 GO:0003735|GO:0005840|GO:0006412
Phco1g01910 278 CDD Ribosomal_L16_L10e 98 223 IPR016180 GO:0003735|GO:0005840|GO:0006412
Phco1g01910 278 FunFam 60S ribosomal protein L10 58 263 - -
Phco1g01910 278 SUPERFAMILY Ribosomal protein L16p/L10e 61 230 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01910 Phco-Chr1 58774822 58778804 Transposed