Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01907 ATGAAGTGCTTTTACTATTTCAAAGACAGATCCAGAAACAGTAAGCAAAGGTCAGCACCTGAACTGAAAAAGCAAGAGAAACTGGAGTTTTCAGGAGCTGAAAGGGTCACCAAGTCTTCATGCTCATCTGCCTCACCCCGCGGTATACCGGAACTGTATGAGGAGAAGGGTCACAATTTGAGGGTCTTCTCCATCTCAGAGCTCAAGCATGCAACAAGTGATTTCAACAGGCTTTTTCAGATAGGAGAAGGTGGTTTTGGAAGTGTGTTTAAAGGTTCAATCCAGCCTGCTGATGGGAATGGGAATCCTACTGTAGTTGCCATCAAAAGGCTTAACAAGAATGCATTACAGGGTCATAAGGAATGGCTGACTGAAGTTCAGTTTCTTGGTATTGTGGAACACCCAAATCTCGTCAAGCTCATTGGATACTGTGCTTTGGACGATGAACGAGGCATGCAGAGACTACTCGTGTATGAATACATGCCGAACAAAAGCTTAGAATATCATCTTTTCAATAAAGCACGTGATCCTCTTCCTTGGAAAACTAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAACTTATCTGCATGAAGAATTAGAAATTCAGGTGATATTTCGAGATTTTAAATCTTCAAATGTATTACTGGATAAAGACTTTAAGCCAAAGCTTTCTGATTTTGGACTTGCTAGGGAGGGGCCAGTAGCTGGTGATACTCATGTTTCAACAGCTGTGATGGGGACATATGGTTATGCTGCTCCAGATTACATTGAGACAGGTCATCTCACAGCCAAGAGTGATGTGTGGAGCTTTGGGGTGGTGCTATATGAAATGCTTACTGGCAGGCGTTCAATGGAAAGAAACAGGCCTAAACCAGAGAAGAAACTGCTGGAGTGGGTGAAGCAGTACCCTTCTGATAGCAAGAAGTTTGACACAATAATTGATCAGAGGCTTCAAGGAGAGTATTGCATGAATGGAGCAAGAAAACTGGCAAAACTCGCCGATCATTGCCTGCGAAAGAGTGCGAAAGATCGGCCAACGATGAGTCAAGTGGTGGAGAGACTGAAGCAGATAATGGAAGACTCTGATGAAGAGCAGCCTGCAGATGACAGAAGTGTTGAGATATCAGAAAATGATGCAGCTGAAGTGAAGGGAAATCAGTTAGGCTCTTCAGAGTTGTGGAAGAAGAGGATGGAACATCTTGCAAAACTTGGTGAACGTGTGGAGAGTGTTAGTAGAAAAAGATTCATGATCCTTCAAAGAGCCAATGTGTCCTCATAG 1284 0.4338 MKCFYYFKDRSRNSKQRSAPELKKQEKLEFSGAERVTKSSCSSASPRGIPELYEEKGHNLRVFSISELKHATSDFNRLFQIGEGGFGSVFKGSIQPADGNGNPTVVAIKRLNKNALQGHKEWLTEVQFLGIVEHPNLVKLIGYCALDDERGMQRLLVYEYMPNKSLEYHLFNKARDPLPWKTRLEIALGAAQGLTYLHEELEIQVIFRDFKSSNVLLDKDFKPKLSDFGLAREGPVAGDTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSMERNRPKPEKKLLEWVKQYPSDSKKFDTIIDQRLQGEYCMNGARKLAKLADHCLRKSAKDRPTMSQVVERLKQIMEDSDEEQPADDRSVEISENDAAEVKGNQLGSSELWKKRMEHLAKLGERVESVSRKRFMILQRANVSS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01907 427 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Phco1g01907 427 PANTHER OS01G0588500 PROTEIN-RELATED 26 359 - -
Phco1g01907 427 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Phco1g01907 427 Gene3D Transferase(Phosphotransferase) domain 1 161 384 - -
Phco1g01907 427 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 161 369 - -
Phco1g01907 427 CDD STKc_IRAK 81 359 - -
Phco1g01907 427 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01907 427 MobiDBLite consensus disorder prediction 360 388 - -
Phco1g01907 427 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Phco1g01907 427 SUPERFAMILY Protein kinase-like (PK-like) 58 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01907 Phco-Chr1 58741916 58745077 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco1g01907 PK_Tyr_Ser-Thr 4e-47 CL0016