Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01902 ATGGCATCATCGGATGAAGAGGGTGAAATTATCCCAGATCTTGTTAATAGTTATTGGTTTGAAAATGCAAAGGAGGATTTTGTGTCACTTTCTAGTTTGACATTGTTGTTTAGCATTGGTGAGATCGAATGTGACTTGGGAGAAAAAGTATTTTTGCGTGGCACCACTGATGATGGCCTGCAGAAAATTTACAAACAGATCATAGGATGGAGATTTGAACTTCCCTATGAGCAGCCTGAGATTTCGGTGCTTTCAAAGGACAAAAATTGGATAACACTCCAAAGACCAAGGAAGTGTTTTGAAAGTATATTTAGGACAATCTTGGTCACTATATATTGTTTACATTTTCTGAGATGGAATCCAGAGGAATCTCGAATATCTATTTGGGGCAAAATGAAGAAGGCCTTTAGCACATTTGATATCATACCATCCGAGAATGATATTCTATGTCATCTGAGTTTGATCAGAGAAGCTGTTAAAAGGGACAACGATTTAACAAAATCAAAGTACCTGCACGATTTAATGGAAAAGGGATGTTCACATGAAGGCTTCCATGAGTACAATGATGTTCTTCCTACAAGGAAACCAAAATTTATTGTGGACTCAAAGGATGAGGAGAAAGTCCAATCTGATTGCAAACTCAATACAGATAGAGAGCAAAATATTGGATATGATACCGTTTGTTCAATATGTGATAATGGTGGAGAAATACTTCCTTGTGAAGGAAGTTGTTTGAGATCCTTCCATGCAACCAAAGAAGCTGGTATAGATGCCTTTTGTGAATCCCTTGGCTACACCAGTGCTCAAGTTAAGGCCTTTCCAAACTTTTACTGTCAAAATTGTAAATACAAGCAGCACCAGTGCTTTGCATGTGGCAAATTGGGTTCATCTGATGTATCATCTACAGCAGAGGTATTTCCTTGTGTAACTGCAAGTTGTGGTCACTACTACCATCCTGACTGTGTAGCAAAGCTTCTCTTCCCTGGCACTGACTCTGAACAAGAGGAAATGAGAAAGAAAGTTGCCTTTGGCAAAGCATTTGTCTGTCCTCTTCATACATGTTCTTTATGCAAAAAGGGTGAAATTAAAAATGTCCATCATTTGCAGTTAGCAATATGTAGACGCTGTCCTAAAGCTTACCACAGAAAATGTTTACCCAAGGAAATTTCCTTCACACTTGATTATGATAAGGGCATTGAGCAGAGGGCTTGGGATGGTTTACTTGACCATCGAATTTTGATATATTGCATGGATCATGAGATAGATAGCAAACTTTGGACTCCTGCAAGAGACCATCTGCTATTTCCTGATATGAAAGTCAAAAGGAAGGTATTCAATTACAAATTATTTGACAAAGGAAAAGATACTATAAATTTGGGTAAAAGTTTTGAAGATCTTCCTCCTAAGGAAACATTGGTACCAAACTGGGTTGCAGAGCAAAGTTTTAGCATTCAAGATGGGGATGTTGCCAAAGATTTGGAGAAAATATGTTGTAAGAAAGATATACGTTTCTCCAGTGCATCAGTCAAGTTTGATAGGGATAGAAAATATTTGAAGGTAAAAAATATGCCTGTGTTGAATCATTCCTTACCAAGTCCTGCAAAAAGATTACCTTTGAAAGTTGCTAACTTGTGTAATTCAAGATTACATGAAGCTAAATCTCTGCAGAAAAAAATGGTCAGTGGAAGAATTGACAAAACTGGCTTTGGGAAGCCTCTAGTAAAAAAAATCCGAACATCGCTTGACTTTGATAATGCTGAAATGAAAAACAGTATCTTGTCTTTAATGAAAGAATCCATGTCTACGTTTAATGAGCAAGAATTCATTAAGAACCATCAAGCCTTCTCTACAACATCAGGTTTAACCGAAACTGAATTTCATAAGAACCTTACTGAATTGAAAGTAGAAGGTTCAATTAAGGCTATTCAAGCAGCTTTGCAGAGGTTAGAAGAAGGATGTAGTATTGAAGAAGCAAAAGCTATTTGTGATCCAGGGGTCCTCCATCAGCTTTTCATTTGGCAGAAGCAGCTCAAGGTCTATCTTGCACCTTTTCTCCATGGCATGCGATATACTTCCTTTGGTCGCCATTTCACTAAGATAGACAAACTGAAGGAGGTTGTTAATAGGCTTCATTGGTATGTTCAGAATGGAGACACGGTTTTGGACTTCTGTTGTGGTTCTAATGACTTCAGTTGTCTAATGAAATCAAAGCTTGAACAGATGGGGAAGTCATGTTCATTCAAGAACTATGATTTATTCCAACCTAAGAATGATTTCAACTTTGAAAAGAGAGATTGGATGAGTGTCAATACAGAAGAATTACCACACGGTTCTAAACTTATCATAGGGCTGAATCCTCCTTTTGGGGTGAAGGGTTGTCTTGCTAACAAATTTATAAACAAGGCATTGACTTTCAATCCAAAACTTCTTATACTAATTGTACCCAAAGTGACTAGACGACTTGACCAAAAGAAAGGTGGATATGATTTAATTTGGGAGAATGATGAAATGTTTTCAGGAAAGTCATTTTATCTACCTGGTTCTGTTGATGTACGTGACAAGCAATTAGAAGACTGGAACTTGAAGCCACCACCTTTGTACCTTTGGAGTCACCCTGATTGGACCACTAAGCACAGAAAAATTGCTCAAAAACATTGCCACATCAATGAAAAATATGATGCGCATGTGAAGAATTATCTTATGGAGGAGAATCATGACTGTTACCAGGACTACACTGGCTTGCATGCACCTGGTGATGTTTTGAGCATATTTGATGATATTCCATGTGATAATGATGATGGTGCAGATGAGGAAGTTGCAACTAGCAATGCTCTGGGAGAGGTGAAGGGAACAGTGTTTTCTGATTATGGAGGAGAAATGGAAATGGAGAATAGGTTACCATTTGATGAAGCTGAGCAAATGTGTATTAATATGGAGTTATCAACTCCCTAG 2952 0.3784 MASSDEEGEIIPDLVNSYWFENAKEDFVSLSSLTLLFSIGEIECDLGEKVFLRGTTDDGLQKIYKQIIGWRFELPYEQPEISVLSKDKNWITLQRPRKCFESIFRTILVTIYCLHFLRWNPEESRISIWGKMKKAFSTFDIIPSENDILCHLSLIREAVKRDNDLTKSKYLHDLMEKGCSHEGFHEYNDVLPTRKPKFIVDSKDEEKVQSDCKLNTDREQNIGYDTVCSICDNGGEILPCEGSCLRSFHATKEAGIDAFCESLGYTSAQVKAFPNFYCQNCKYKQHQCFACGKLGSSDVSSTAEVFPCVTASCGHYYHPDCVAKLLFPGTDSEQEEMRKKVAFGKAFVCPLHTCSLCKKGEIKNVHHLQLAICRRCPKAYHRKCLPKEISFTLDYDKGIEQRAWDGLLDHRILIYCMDHEIDSKLWTPARDHLLFPDMKVKRKVFNYKLFDKGKDTINLGKSFEDLPPKETLVPNWVAEQSFSIQDGDVAKDLEKICCKKDIRFSSASVKFDRDRKYLKVKNMPVLNHSLPSPAKRLPLKVANLCNSRLHEAKSLQKKMVSGRIDKTGFGKPLVKKIRTSLDFDNAEMKNSILSLMKESMSTFNEQEFIKNHQAFSTTSGLTETEFHKNLTELKVEGSIKAIQAALQRLEEGCSIEEAKAICDPGVLHQLFIWQKQLKVYLAPFLHGMRYTSFGRHFTKIDKLKEVVNRLHWYVQNGDTVLDFCCGSNDFSCLMKSKLEQMGKSCSFKNYDLFQPKNDFNFEKRDWMSVNTEELPHGSKLIIGLNPPFGVKGCLANKFINKALTFNPKLLILIVPKVTRRLDQKKGGYDLIWENDEMFSGKSFYLPGSVDVRDKQLEDWNLKPPPLYLWSHPDWTTKHRKIAQKHCHINEKYDAHVKNYLMEENHDCYQDYTGLHAPGDVLSIFDDIPCDNDDGADEEVATSNALGEVKGTVFSDYGGEMEMENRLPFDEAEQMCINMELSTP 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01902 983 CDD PHD2_NSD 287 352 - -
Phco1g01902 983 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 687 839 IPR029063 -
Phco1g01902 983 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 374 IPR013083 -
Phco1g01902 983 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 283 IPR013083 -
Phco1g01902 983 SMART PHD_3 227 282 IPR001965 -
Phco1g01902 983 SMART PHD_3 287 353 IPR001965 -
Phco1g01902 983 SMART PHD_3 354 420 IPR001965 -
Phco1g01902 983 Coils Coil 639 659 - -
Phco1g01902 983 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 5 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01902 Phco-Chr1 58699085 58707561 Transposed