Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01894 ATGGCTTCTCCGCCACCGTTAACGCTAAACGTCGTCGGATCAGACACGGACAGCGCGTTCCCAACTGTCGCTTCCAGTTCCCTAACGCCTCCGTCACCGCGCCATTCGTCTCCGTTACAGAGCCTCAGTCCGAGTATTCTCATTATCGTCACGGTCCTCGCCGTCACCGTTATCGTTTCTCTCGCGCTTTGCTTCCTCCTCCGCCACCTCAACCGCCGCTGCCTCCGCCGCTTCTCCTCCTCCTCCGCTGCGCCCTCCGCATCCGCCTCTGCCACGCCGATATTCTCCTCCAGCCGCCGCATCTCGCCGGAGATTGTGCACTCCTCGTCGGCCGCTACCGCTTCTGTCATCGACACGCTGCCGCTGTTCACGTTCTCCTCCGTCACGCGCCGCTCCGCCTCCGCTGCCGCCGACTGCGCGGTCTGCCTCTCTAAGTTCCACAACCACGACCTCCTCCGCCTCCTCCCTCTCTGCTGCCACGCCTTCCACGCCGAGTGCATCGACACCTGGCTCCAGTCCAACCTCTCATGTCCGCTCTGCCGCTCTCCCATCGCCGCCGCGGAATCCGACCTCGCGAAAATCCTCCGCCCGCCGTCCTCAGCCGCCGGCAGTAGCGACAGCTTCCGCCTCGAGTTAGGCAATATCAGCCGCCGTGGCGCCGAAGGCGCCCCCGCCGCTCGCAGCGATTCACGCTCCCGGTCCTATTCCATTGGTTCGTTCGAGTATTTGGTGGACGACGACTCGGAGGTTGCGTTCAGCCACGCTCGCCGGAGAAGCGAGGACGATGCAAAGGAGTTTCCGGCAGCGGAGGCTCAGAATCCGGCGAATCATAACGAGGCGAGTCTGGCCGGCGAGGTTGCCGGCGTTAGGAGCTGGCTTAAGGACTACATGGATAGGTTTTCCGCTTCCATCTCGTCGCGAACGGCGTCTTTTCGAAGCTCTGGAAGGTTCTTCAGCGGTGGCGGGAGCAGTCGGCGAAGCGACGTGGTTCCAGTGGATGCTGCGGAATACGACTTGGAAGGGAACCGAATTGGCGAAGAAATCAGCGAAATGTTTCGTTGGCTTTCAGGGGTATGA 1077 0.6221 MASPPPLTLNVVGSDTDSAFPTVASSSLTPPSPRHSSPLQSLSPSILIIVTVLAVTVIVSLALCFLLRHLNRRCLRRFSSSSAAPSASASATPIFSSSRRISPEIVHSSSAATASVIDTLPLFTFSSVTRRSASAAADCAVCLSKFHNHDLLRLLPLCCHAFHAECIDTWLQSNLSCPLCRSPIAAAESDLAKILRPPSSAAGSSDSFRLELGNISRRGAEGAPAARSDSRSRSYSIGSFEYLVDDDSEVAFSHARRRSEDDAKEFPAAEAQNPANHNEASLAGEVAGVRSWLKDYMDRFSASISSRTASFRSSGRFFSGGGSSRRSDVVPVDAAEYDLEGNRIGEEISEMFRWLSGV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01894 358 CDD RING-H2_EL5-like 138 181 - -
Phco1g01894 358 SUPERFAMILY RING/U-box 127 186 - -
Phco1g01894 358 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 38 284 - -
Phco1g01894 358 SMART ring_2 139 180 IPR001841 -
Phco1g01894 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 190 IPR013083 -
Phco1g01894 358 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
Phco1g01894 358 Pfam Ring finger domain 138 181 IPR001841 -
Phco1g01894 358 MobiDBLite consensus disorder prediction 254 277 - -
Phco1g01894 358 FunFam E3 ubiquitin-protein ligase ATL4 112 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01894 Phco-Chr1 58634945 58636021 Transposed