Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01877 ATGAAATGGAAAAAAGGAAAATATAAAGATACCCACACAATCCGAATAGATCAACGTGTTGAAAGATTTCCAAACGCCATGTCCACTCTGCACCTTCACTTCGCTCCCACTCCTTCACCTTCCTTCGCTCCGATCACTTCTTCTCGCTTCTTCCGAACCTCTCGCATCTCGCTTCGAAACGCCGTCTGCTGCAAGGCGATAGAAGCAGTGCAGTTGGAGAACGGGAGGCCGAGCGCCAGAGACTTCGCCGCCAGAGGAAACGCGATTCCGAGCTACGTCGAGGCGCCGAACGCGCGGATTCGGGATTTGGTTAACCGGCACGATACGCGTCTGAGGATATTCTCCGGCACCGCCAATCCCGCGCTTTCTCAGGAAATTGCATGCTACCTGGGTCTGGAGCTTGGAAAAATTAAGATAAAGCGCTTTGCTGATGGCGAGATATACGTTCAGCTCCAAGAGAGTGTGAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCAAATGAGAATCTTATGGAGCTTCTCATAATGATTGACGCTTGCAGGAGAGCTTCAGCCAAAAATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCAAAGCTTGTAGCAAATTTAATTACAGAAGCGGGCGCAAATCGTGTACTTGCCTGTGATCTCCATTCTGGACAATCAATGGGCTATTTTGATATTCCAGTTGATCATGTGTATGGACAGCCTGTCATACTTGATTACCTTGCCAGCAAAACTATTTGTTCAGACGATTTGGTAGTTGTCTCGCCAGATGTTGGTGGTGTTGCCAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCCTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCAGAGGTGATGAATTTGATAGGTGATGTAAGGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGGACTATTGCCAAAGGTGCAGCTCTGTTGCATCAAGAAGGGGCTAGGGAAGTCTATGCATGTACCACGCATGCTGTTTTCAGTCCTCCTGCTATAGAGAGGTTATCAAGCGGTTTGTTTCAAGAAGTTATCATAACTAACACAATTCCAGTGGCAGAACAGAACTATTTCCCCCAATTAACTGTCTTGTCGGTTGCAAACCTTCTGGGCGAGACTGTATGGCGAGTTCATGATGATTGCTCAGGTGGAATTGAACCTTATTCAAGTTTGGGCATTGATTGA 1284 0.4665 MKWKKGKYKDTHTIRIDQRVERFPNAMSTLHLHFAPTPSPSFAPITSSRFFRTSRISLRNAVCCKAIEAVQLENGRPSARDFAARGNAIPSYVEAPNARIRDLVNRHDTRLRIFSGTANPALSQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSGGIEPYSSLGID 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01877 427 SUPERFAMILY PRTase-like 176 412 IPR029057 -
Phco1g01877 427 Gene3D - 114 412 IPR029057 -
Phco1g01877 427 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 111 227 IPR029099 -
Phco1g01877 427 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 111 421 IPR037515 GO:0004749
Phco1g01877 427 SMART Pribosyltran_N_2 111 227 - -
Phco1g01877 427 Gene3D - 254 397 IPR029057 -
Phco1g01877 427 FunFam Ribose-phosphate pyrophosphokinase 114 266 - -
Phco1g01877 427 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 235 250 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Phco1g01877 427 NCBIfam ribose-phosphate diphosphokinase 112 414 IPR005946 GO:0000287|GO:0004749|GO:0009165
Phco1g01877 427 CDD PRTases_typeI 270 382 IPR000836 -
Phco1g01877 427 Pfam Phosphoribosyl synthetase-associated domain 312 415 IPR005946 GO:0000287|GO:0004749|GO:0009165
Phco1g01877 427 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 110 415 IPR005946 GO:0000287|GO:0004749|GO:0009165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01877 Phco-Chr1 58332366 58339844 Dispersed