Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01860 ATGTTTGGTATCATATCATGGCTGGGACAAATCTTCTTCAAGTTACTTGGTAAGGAGTGGAGGAAAAAGAAAATTAGAAAGATAACAGACCAAGTTTTTGACCAACTCCAGAATGAAGTGCAATCTGATAACTTGAGTTTTGGAGATATCTATATTGCTACTTTACTTGTGTACAATGGTATCAACAAGTATATTCCTGGTCCCCATTGTGACCCTCCTTCAAAAGACGCAGTCAGACAATTCATTGAGAATTGTGATGATAACAAGGATGGTCAAATTGATCGTGATGAATTTTTCGGTTTCATTCGGCAAATGGCACCTGAAATATTCAACGTTGTTCGTAAAAAACTAGTAGCCACTTTGGTTGTTGCACCAACAGTTGCAGCAACAACAAAAAAAACTACTGAACAAGTCCCAGGTGTTGGGAAACTGGTGCAAAGGTTACCCAAAGCAGTTTATGCTGCCCTTTTGACAATTGCAGCTGTGTGGTTCCAAGAGAGCAATCAGGGTTCTGCACACTAG 522 0.3966 MFGIISWLGQIFFKLLGKEWRKKKIRKITDQVFDQLQNEVQSDNLSFGDIYIATLLVYNGINKYIPGPHCDPPSKDAVRQFIENCDDNKDGQIDRDEFFGFIRQMAPEIFNVVRKKLVATLVVAPTVAATTKKTTEQVPGVGKLVQRLPKAVYAALLTIAAVWFQESNQGSAH 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01860 173 ProSitePatterns EF-hand calcium-binding domain. 86 98 IPR018247 -
Phco1g01860 173 ProSiteProfiles EF-hand calcium-binding domain profile. 73 108 IPR002048 GO:0005509
Phco1g01860 173 Gene3D - 5 118 - -
Phco1g01860 173 SUPERFAMILY EF-hand 62 107 IPR011992 -
Phco1g01860 173 PANTHER CALCIUM ION-BINDING PROTEIN 13 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01860 Phco-Chr1 58199348 58202410 Tandem