Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01855 ATGCAAAGGTTAATCACTTGTATCTTGATTCTAGATTTTGTTTCAGCCACATTGTGTCTCAGCAGCAATGGTGAAAACCAAGTAAACTATTTTAATGTGATGGATTATGGAGCTCATGGTGATGGCACAAGTGATGATTCAAATGCAATTTCAAATGCATGGCAAGGTGTGTGTGGAGAGCAAGGACCAGCAACTCTACTTATACCTTCAAGCAAAATATTTTTGGTGAAAAGATTAAACCTAAGTGGTCCATGCAAGACCCCAAATGTTGGCATTAAGTTTGAAGGGAAAATAGTAGCTCCATCTATGAATGAATGGGTTGGTGATTCTTTGAGTTGGATTCAGATATTTTATGTAAATGGTCTAACAATTGATGCTGATGGAGGAAGCATTGATGGCTATGGTTCTACTTGGTGGCAGAAATGCAGAAGTTGCACAAGGCCAACATCCTTGCGTTTCCATTCTTGTAATGGTCTTACTGTGAAAAATCTGAGTATGAGTAACAGCCCTGGAGCTCACATATCTGTAAATGGCTGCGATGGTGCATTCTTCTCTCAAATCAATATCAATTCTCCTCGGGATAGTCCTAACACTGATGGATTTGATATTGCTGTTTCCAAAAATATAGCAATTGAAGATTCCACTCTTGCAACAGGTGATGATTGTATTGCCATCAATGGTGGCTGTTCTTACATCAATGCCACTAGACTTGTTTGCCAAGGAGGCCATGGGATAAGCATTGGAAGCCTTGGTAAAAATAAATCCTATGAGACAGTTGAAGAGGTACATGTACGTAATTGCAGCTTCATTGGCACTACAAATGGTGCAAGAATCAAGACATGGCCGGGTGGATCAGGCTATGCAAGAAAAATCACCTATGAAGAAATCATACTTGAAGATGTTCAGAATTCAATTATTATAGACCAATACTATGGGATTAAAACTCCAAATGAAGTGGAAGATGCAGTGAAGGTGAGTGAAGTGACTTACAGTGGGTTCAATGGCACTTCTGCCAGTGACAAGGCAATTAACTTGAATTGTAGCCCATCTGGTTGTTTCAACATTACATTGGATCAAATTTACATTGTCTCTTCAAAATCAACCAAAGTCTATGCTTTTTGCAAGAATATTGTTAATGGGACGATTGGACACACAGTTCCAAAAGTATCTTGTGCATAA 1179 0.3893 MQRLITCILILDFVSATLCLSSNGENQVNYFNVMDYGAHGDGTSDDSNAISNAWQGVCGEQGPATLLIPSSKIFLVKRLNLSGPCKTPNVGIKFEGKIVAPSMNEWVGDSLSWIQIFYVNGLTIDADGGSIDGYGSTWWQKCRSCTRPTSLRFHSCNGLTVKNLSMSNSPGAHISVNGCDGAFFSQININSPRDSPNTDGFDIAVSKNIAIEDSTLATGDDCIAINGGCSYINATRLVCQGGHGISIGSLGKNKSYETVEEVHVRNCSFIGTTNGARIKTWPGGSGYARKITYEEIILEDVQNSIIIDQYYGIKTPNEVEDAVKVSEVTYSGFNGTSASDKAINLNCSPSGCFNITLDQIYIVSSKSTKVYAFCKNIVNGTIGHTVPKVSCA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01855 392 Gene3D - 16 389 IPR012334 -
Phco1g01855 392 Pfam Glycosyl hydrolases family 28 58 378 IPR000743 GO:0004650|GO:0005975
Phco1g01855 392 ProSitePatterns Polygalacturonase active site. 236 249 IPR000743 GO:0004650|GO:0005975
Phco1g01855 392 PANTHER - 29 377 - -
Phco1g01855 392 SUPERFAMILY Pectin lyase-like 26 391 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01855 Phco-Chr1 58131776 58136321 Dispersed/Tandem