Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01815 ATGTCTTCAAGATCTGGTGGTAGTGCATGGCCTTACCCCATCAAAACGATCGTCGTTTTGGTTCAAGAAAACCGTTCATTTGACCACATGTTGGGTTGGATGAAGTCCCTAAACCCGGAAATCGACGGGGTCACCGGTTCGGAGTCGAACCCGATTTCCACCTTGGAGCCAAGCTCGAACCGGGTTTATTTTTCCGACCAGTCTGATTTTGTTGAACCGGACCCGGGTCACACGGTCGAGGACGTGTACGAGCAAGTTTTCGGCGAGCCGTGGAGCGAGTCCTCGATGAGAAAGAAAGTGTCGCCGAGAATGGAAGGGTTCGCCCAAAACTCGGTGAAGCAAAAGAAGGGATCAACGGCGGAGACAGTGATGAACGGGTACAAACCGGAGCTGTTACCGGTTTACAGAGAGTTGGTTAAGGAGTTTGCGGTGTGTGATCGGTGGTTTGCTTCGGTTCCCGGTCCGACCCAACCGAACCGGCTCTACGTTCACTCTGCGACGTCGTATGGGTTGACCACTCAGGACACACAGAAACTGATTGGAGGTTTGCCACAGAAGACTATATTTGATTCTTTGGACGAAAATGGGTTCAGTTTTGGAATATATTACCAATACCCACCATCCACTCTTTTTTATAGAAACCTGAGGAAAGTGAAATACATAGACAACTTTCATTTGTTTGATTTAAAGTTCAAGAAGCATTGTGAAGAAGGGAAATTGGAAAACTACGTGGTGATTGAGCAAAGATATTTTGAGTTGTTATCAGTGGCAGCAAATGATGATCATCCATCTCATGATGTTGGTGAGGGACAAAGGTTTGTGAAAGAAGTATATGAGGCACTAAGAACAAGTCCTCAATGGAATGAAATATTGTTTCTGATTACATATGATGAACATGGAGGGTTCTATGATCATGTGCCAACACCTGTGGATGGAGTTCCAAACCCAGATGACATTGCAGGTCCTGCTCCCTTCAAGTTTCAGTTTGATAGACTTGGTGTTAGGGTTCCTACCATCATTATTTCTCCATGGATTCAACCAGGAAAAGTGTTGCATGAACCTTCTGGGCCATTCCCAACATCACAGTATGAACATTCATCAATACCAGCAACTGTGAAGAAAATCTTCAATCTTCCTCAGTTCTTGACAAAGCGTGATGCATGGGCTGGAACATTTGAAAATCTCTTATCTCTAACCACTCCACGTACTGATTGTCCAGTGAAAATGCCCGAGCCTATCAAACTAAGAAAGGTTGCTGGTGAAGAAAATGCAGAATTGAGTGAATTTCAGGAAGAATTGATATACATGACAGCAACTTTAAATGGGGATCATAATAAGAGCACATACCCCAAACTAACACAGAATTTAACTGTCTCAGAGGCAGTTAAATACTGTGAAGGAGCATTTCAAACATTCTTGAATGAGTGTGAGAAAGCAAAGCAAAGTAGAATTGATGGATCTGAAATTGTTCATTGTGCAAAGCCACACACACCTCCACAATCCAAAACTTTCTTGCACAAAATCTTCTCTTGTCTATTATGGAATGAACCAGATTGGTGTGTCCAAAATGAAATTGGATTTGCAAATTTGCGAGAGAGGAGACAGAGAGAAGAAGCCGCAGAGGAAGAGGAAGAAGAAGAAGAAAGAAGAAGAATGGGGCGCGTGAGGACGAAGACGGTGAAGAAATCTTCACGGCAAGTGATTGAGCGCTACTATTCGAGGATGACGCTGGATTTTCACACGAACAAGAAGCTTCTAGAAGAAGTGGCGATCGTCCCCTCGAAGAGGCTGCGGAACAAGATAGCAGGTTTCTCCACACATCTCATGAAACGGATCCAGAAGGGTTCTGTTCGCGGCATCTCGCTCAAGCTGCAGGAGGAGGAGAGGGAGCGACGCATGGACTTCGTCCCCGACATCTCCGCCATCAACACCGACCACATCGAGGTTGACAAGGAAACCATGGATATGCTCCACTCCCTCGGACTCAACGAAATCAGCGGCATCACCCAGGTTGACCCTGTCCCTGTCCAACAAAACTTCCCCTTCACCAGGAGGTACTGA 2061 0.4556 MSSRSGGSAWPYPIKTIVVLVQENRSFDHMLGWMKSLNPEIDGVTGSESNPISTLEPSSNRVYFSDQSDFVEPDPGHTVEDVYEQVFGEPWSESSMRKKVSPRMEGFAQNSVKQKKGSTAETVMNGYKPELLPVYRELVKEFAVCDRWFASVPGPTQPNRLYVHSATSYGLTTQDTQKLIGGLPQKTIFDSLDENGFSFGIYYQYPPSTLFYRNLRKVKYIDNFHLFDLKFKKHCEEGKLENYVVIEQRYFELLSVAANDDHPSHDVGEGQRFVKEVYEALRTSPQWNEILFLITYDEHGGFYDHVPTPVDGVPNPDDIAGPAPFKFQFDRLGVRVPTIIISPWIQPGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPQFLTKRDAWAGTFENLLSLTTPRTDCPVKMPEPIKLRKVAGEENAELSEFQEELIYMTATLNGDHNKSTYPKLTQNLTVSEAVKYCEGAFQTFLNECEKAKQSRIDGSEIVHCAKPHTPPQSKTFLHKIFSCLLWNEPDWCVQNEIGFANLRERRQREEAAEEEEEEEERRRMGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKLLEEVAIVPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDISAINTDHIEVDKETMDMLHSLGLNEISGITQVDPVPVQQNFPFTRRY 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01815 686 Pfam Ribosomal S17 552 671 IPR001210 GO:0003735|GO:0005840|GO:0006412
Phco1g01815 686 SUPERFAMILY Rps17e-like 552 613 IPR036401 GO:0003735|GO:0005840|GO:0006412
Phco1g01815 686 FunFam 40S ribosomal protein S17 552 613 - -
Phco1g01815 686 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 11 476 IPR007312 GO:0016788
Phco1g01815 686 FunFam Non-specific phospholipase C1 239 424 - -
Phco1g01815 686 Hamap 30S ribosomal protein S17e [rps17e]. 552 614 IPR001210 GO:0003735|GO:0005840|GO:0006412
Phco1g01815 686 SUPERFAMILY Alkaline phosphatase-like 181 354 IPR017850 -
Phco1g01815 686 Coils Coil 527 551 - -
Phco1g01815 686 ProSitePatterns Ribosomal protein S17e signature. 592 607 IPR018273 GO:0003735|GO:0005840|GO:0006412
Phco1g01815 686 Gene3D Alkaline Phosphatase, subunit A 9 188 IPR017850 -
Phco1g01815 686 Gene3D Alkaline Phosphatase, subunit A 242 423 IPR017850 -
Phco1g01815 686 Pfam Phosphoesterase family 14 379 IPR007312 GO:0016788
Phco1g01815 686 Gene3D - 552 613 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01815 Phco-Chr1 57706529 57730565 Tandem