Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g01814 | ATGGGGCGCGTGAGGACGAAGACGGTGAAGAAATCTTCTCGGCAAGTGATCGAGCGTTACTATTCGAGGATGACGCTGGATTTTCACACGAACAAGAAGCTTCTAGAAGAAGTGGCAATCGTCCCCTCGAAGAGGCTGCGGAACAAGATCGCAGGTTTCTCCACACATCTCATGAAACGGATCCAGAAGGGTTCTGTTCGCGGCATCTCGCTCAAGCTGCAGGAGGAGGAGAGGGAGCGACGCATGGACTTCGTCCCCGACATCTCCGCCATCAACACCGACCACATCGAGGTGGACAAGGAAACCATGGATATGCTCCACTCCCTCGGACTCAACGAAATCAGCGGCATCACCCAGGTTGACCCTGTCCCTGTCCAACAAAACTTCCCCTTCACCAGGAGGTACTGA | 408 | 0.5441 | MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKLLEEVAIVPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDISAINTDHIEVDKETMDMLHSLGLNEISGITQVDPVPVQQNFPFTRRY | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g01814 | 135 | ProSitePatterns | Ribosomal protein S17e signature. | 41 | 56 | IPR018273 | GO:0003735|GO:0005840|GO:0006412 | |
| Phco1g01814 | 135 | FunFam | 40S ribosomal protein S17 | 1 | 62 | - | - | |
| Phco1g01814 | 135 | Hamap | 30S ribosomal protein S17e [rps17e]. | 1 | 63 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
| Phco1g01814 | 135 | Gene3D | - | 1 | 62 | IPR036401 | GO:0003735|GO:0005840|GO:0006412 | |
| Phco1g01814 | 135 | PANTHER | 40S RIBOSOMAL PROTEIN S17 | 1 | 129 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
| Phco1g01814 | 135 | Pfam | Ribosomal S17 | 1 | 120 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
| Phco1g01814 | 135 | SUPERFAMILY | Rps17e-like | 1 | 62 | IPR036401 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco1g01814 | Phco-Chr1 | 57698102 | 57698509 | Tandem |