Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01812 ATGGAAGAAACGACACTGTTTTGTGAGGAAATGAAAGAAGCTCAAAAAGCAGCCATGGAGAAACAATGGAAAGAGTTCAAGAAAAGAATGATGGAAAAGCCGGAAAACATCCTGAAGCAGTTTGACCTGTTTGGGAACACTGCCATCCATGTTGCAACTCGCTCCAACCCTCAACTCCTCACAGAGTTCATAGAAATGGTGCCTGTACAACAAAGGTGGGACGCTTTGTGCAAGAAGAATGTTGAGGGAAACACTGTCTTGCACGAACTTGTGTTTTCCAAAAAGGCGCGGGAAATGGCTGTTGTGGTGTTCAGATTTGAAGATCAGTTGCTGACACCACGAAAGGAGCCATTGCTAGAGCTCAGAAACAACCGAGGAGAAACCCCTTTGTTCGTCGCTGCCATGCATGGAAAGCAGAAGATTCTCAAGTATATGGCTGAGCGTGTAGGCACTATGAATCTTGGAAAACATTTTCGTCGATCTGACAAATATAATGCTCTTCATGCAAGTGTCATTGGCCAACATTTTCATGTTGCAATTTGGCTGGAAAGAAATGATGAAAAACTTGCTTTGGAAAAGGATGAGAAGGACTTAACATCTCTTCAACTACTTTTCAAAATGCCACAGGTTTTTCGAAGCCATACTCACATCGGACCCTTCAAGAGCACCATTTATCTCTTGCTTCCTGATGGATATGATAATGATGAACATTCTTTGTTGTTTAAACAAAAGAAGGATGAAGAAAATGGTAAAGAGGATGATGAGCCTACACTCTGCAAATCAGATAAAGGAAGAACTGTATTGCATGAAGTTGCCATAATGGATTACTACAAAGAAGAACACTTAGCTGGAGTGGCATTCCATCTACAAAATGAGTTGCGTTGGTATGATAGTGTGAGAAGATTCATACCTAAAAATTACAACATGCATTGTGACATAGATGGACACACACCCGAAAATACGTTAGAAATTGAGCATGATGAAATGCTTAAAGAGGCACAAAAATGGTTAAAGGGAACGGCTCAATCATGCTCCACTATTGCTATTTTGGTTGCTACTGTTGTATTTGCTGCTGCATACACCATTCCAGGGGGAACTCAAAATGGTACTCCTGTATTCCTTCATTCAAGTGTGTTTCTCCTTTTCACCATCATGGATGTTGTGGCTCTTGCTCCCTCGCTTGCTTCAGTCGTCATCTTCCTTTCCATTCTCACTTCCCCATGTGAGTTATGGGATTTTCATAAGTCTCTCCCTCGGAAACTGAATTTGGGATTTGCTTTGTTGTTCTTTTCATTGATGACAACAATGCTTGCAATCATTCAATTTCCTATTTATGTCATGGCTCGAAGTATCACCAAGCATCTATGGAAGCAGCTTAAGAAGTTCTTTCCAACAAGATTGATTCAACAGTGCATGGGTCATACTTGA 1428 0.4104 MEETTLFCEEMKEAQKAAMEKQWKEFKKRMMEKPENILKQFDLFGNTAIHVATRSNPQLLTEFIEMVPVQQRWDALCKKNVEGNTVLHELVFSKKAREMAVVVFRFEDQLLTPRKEPLLELRNNRGETPLFVAAMHGKQKILKYMAERVGTMNLGKHFRRSDKYNALHASVIGQHFHVAIWLERNDEKLALEKDEKDLTSLQLLFKMPQVFRSHTHIGPFKSTIYLLLPDGYDNDEHSLLFKQKKDEENGKEDDEPTLCKSDKGRTVLHEVAIMDYYKEEHLAGVAFHLQNELRWYDSVRRFIPKNYNMHCDIDGHTPENTLEIEHDEMLKEAQKWLKGTAQSCSTIAILVATVVFAAAYTIPGGTQNGTPVFLHSSVFLLFTIMDVVALAPSLASVVIFLSILTSPCELWDFHKSLPRKLNLGFALLFFSLMTTMLAIIQFPIYVMARSITKHLWKQLKKFFPTRLIQQCMGHT 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01812 475 Pfam Domain of unknown function 334 438 IPR026961 -
Phco1g01812 475 Gene3D - 1 207 IPR036770 -
Phco1g01812 475 SUPERFAMILY Ankyrin repeat 34 206 IPR036770 -
Phco1g01812 475 PANTHER CASKIN 46 460 - -
Phco1g01812 475 SMART ANK_2a 44 72 IPR002110 GO:0005515
Phco1g01812 475 SMART ANK_2a 162 191 IPR002110 GO:0005515
Phco1g01812 475 SMART ANK_2a 125 154 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01812 Phco-Chr1 57661838 57673411 Tandem