Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01811 ATGGATGAAATGCAGGCGAAGGAGGGAGGAGAGTTGGAGAGAATGGAAGAAACGAAACTGTTTTGTGAGGAAATGAAAGAAGCTCAGAAAGCAGCCATGGAAAAACAATGGACAGAGTTCAAGAAAAGAATGATGGAAAAGCCGGAGAACATCCTGAAGCAGTTTGACCTGTTTGGGAACACTGCCATCCATGTTGCAAGTCGCTCCAACCCTCAACTCCTCACAGAGTTCATACAAATGGTGCCGGTAGAACAAAGGTGGGACGCTTTGTGCAAGAAGAATGTTGAGGGAAACACTGTCTTGCACGAGATTGTGTTTTCAAAAAAGGCCAAGAAAATGGTTGATGTGGTGTTCAGATTTGAAGAACAGTTGGTGACACCAGAAAAGGAGCCATTGCTAGAGCTCAGAAACAACCGAGGAGAAACCCCTTTGTTCGTTGCTGCCATGCATGGAAAGCTGAAGATTCTCAAGTATATGGCTGAGCGTGTAGGCACTGTGAATCTTGGAAAACATTTTCGTCGATCTGGCAAATATAATGCTCTTCATGCAAGTGTCATTGGCCAACATTTTCATGTTGCAATTTGGCTGGAAAGAATGGATGAAAAACTTGCTCTGGAAAAAGATGGGAAGGACTTAACATGTCTTCAACTACTTTCCAAAATGCCACAGGTTTTTCGAAGCCAGACTCACATGGGACCCTTCAAGAGCATCATTTATTTCTTGCTTCCTGATGGATATGATAATGATGAACACTCTCCGTTGTTTAAAAAAAAGAAGGATGAAGAAAATGGTAAAAAGGATGATGAGCCTACACTCTGCAAATCAGAGTTTGAAGGAATTGACCAAATGTGGAAGGAAAAGAAAAAGCATAAGTTGGCTGAACATCTAGCCAGCATTCTGGTAACATATGACTTATCATGGCAAGTATCAAAAAATGAGTATAATAGGACAATATTGGTTGCAATGCCACGTGATCCTTTAAATGTGGCCAAAAGGAGAAGAGTAAGTGTACAAAAAAGGGAAGAGAGGCGTAAGAACACTGAAGAACGTCCAGAACGCACAGCACTGTTCTTAGCAACTAAAACTGGAATTGTAGAAATTGTTAATAAATTTCTTCAAGTGCATCCTGCAGCTATATATCATGTTACTGAGAATAAGCAGAACATATTGAACATGGTTGTTAAGTATCGACAAAAGAAAATTCTTAAATTGATAGAAAGAACAGGCACAATTGAATCATTGGTTGCTCAAATCACAGATAAAGGAAGAACTGTGTTGCATGAAGTTGCAAGAATGGATTACTACAAAGCAGAACACTTAGCTGGAGTGGCATTCCATCTACAAGATGAGTTGCGTTGGTATGATAGTGTGAGAAGATTCACACCTAAACATTACAACATGCACTGTGACATAGATGGATACACACCAGAAGATATGTTAGAAATTGAGCATGATGGAATGCTTAAAGAGGCACAAAAATGGTTAAAGGAAACAGCTCAATCATGCTCCACTGTTGCTATTCTGGTTGCTACAGTTGTATTTGCTGCTGCATACACCATTCCAGGGGGAACTGAAAATGGTACTCCTGTATTCCTTCATTCAAGTGTGTTTCTCTTTTTCACCATCATGGATGTTGTGGCTCTTGCTACCTCACTTGCTTCAGTCGTCGTCTTCCTCTCCATCCTCACTTCCCCATGTGACTTATGGGATTTTCACAAGTCTCTCCCTCGGAAACTGAATTTGGGATTTGCTTTGTTGTTCTTTTCATTGATGACAACAATGCTTGCATTCAGTGCAACCATGTTGCTCACCATTCGATTGGAATGGAAGAATTGGACTTCAACATTGATATACAGTGCTGCTTTCTTTCCTGTCACTATATTTGCAATCATTCAATTTCCTGTTTATGTCATGGCTCGAAGTATCAGCAAGCATCTATGGAAGCAACTTAAGAAGCTCTTTCCAGCAAGATTGATTCAACACTGCATGAGTCATACTTGA 2001 0.4043 MDEMQAKEGGELERMEETKLFCEEMKEAQKAAMEKQWTEFKKRMMEKPENILKQFDLFGNTAIHVASRSNPQLLTEFIQMVPVEQRWDALCKKNVEGNTVLHEIVFSKKAKKMVDVVFRFEEQLVTPEKEPLLELRNNRGETPLFVAAMHGKLKILKYMAERVGTVNLGKHFRRSGKYNALHASVIGQHFHVAIWLERMDEKLALEKDGKDLTCLQLLSKMPQVFRSQTHMGPFKSIIYFLLPDGYDNDEHSPLFKKKKDEENGKKDDEPTLCKSEFEGIDQMWKEKKKHKLAEHLASILVTYDLSWQVSKNEYNRTILVAMPRDPLNVAKRRRVSVQKREERRKNTEERPERTALFLATKTGIVEIVNKFLQVHPAAIYHVTENKQNILNMVVKYRQKKILKLIERTGTIESLVAQITDKGRTVLHEVARMDYYKAEHLAGVAFHLQDELRWYDSVRRFTPKHYNMHCDIDGYTPEDMLEIEHDGMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSSVFLFFTIMDVVALATSLASVVVFLSILTSPCDLWDFHKSLPRKLNLGFALLFFSLMTTMLAFSATMLLTIRLEWKNWTSTLIYSAAFFPVTIFAIIQFPVYVMARSISKHLWKQLKKLFPARLIQHCMSHT 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01811 666 SMART ANK_2a 58 87 IPR002110 GO:0005515
Phco1g01811 666 SMART ANK_2a 139 168 IPR002110 GO:0005515
Phco1g01811 666 SMART ANK_2a 351 381 IPR002110 GO:0005515
Phco1g01811 666 Gene3D - 2 223 IPR036770 -
Phco1g01811 666 Pfam Domain of unknown function 492 602 IPR026961 -
Phco1g01811 666 PANTHER CASKIN 60 642 - -
Phco1g01811 666 Gene3D - 310 452 IPR036770 -
Phco1g01811 666 ProSiteProfiles Ankyrin repeat profile. 139 171 IPR002110 GO:0005515
Phco1g01811 666 SUPERFAMILY Ankyrin repeat 32 434 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01811 Phco-Chr1 57639450 57653233 Tandem