Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01800 ATGGAGTCTTGTCGTACTATGTGCTTGTGTTTGGTCTTACTTCAAATTTTCCTGTGCTTAGTGTCAACACAATCAGCACCAGAAAGTGCCACTGTGACACAGGTTCCTGGCTTCAGTGGGACTCTACCTTCCAAGCACTATGCTGGGTATGTGACAGTGGGTGAGAATCATGGGAAGAACTTGTTTTACTATTTTGTTGAATCACAGGGTAAACCTTCAGAGGACCCTGTGGTTTTGTGGCTTAATGGGGGACCTGGCTGCTCTAGTTTTGATGGATTCGTATATGAGCATGGTCCTTTTAATTTTGAGGCAGCAAAGACAAAGGGGGGTCTTCCCACACTACACCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTGTTATATATTTGGATTCTCCTGCTGGTGTGGGGTTTTCATACTCAAAGAATGCAACTGATTATATAACTGGAGACACAAAGACTGCCTCTGATTCACATGATTTTCTCCTTAAGTGGTTTGAACTATACCCCGAGTTCCTTTCCAACCCGTTCTTCATTGCGGGAGAGTCCTATGCAGGAGTGTATGTGCCTACTCTTGCTTCTGAAGTTGTGAAAGGAATTGAGGCTGGTGTGGAGCCCAAGCTAAATTTCAAGGGTTACATGGTTGGAAATGGTGTCACAGATGAACAATTTGATGGCAATGCTCTTATTCCATTTGTATATGGGATGGGACTTATCTCAGATGACCTGTTCAAGGAGGTGAACAGTGAGTGCAACGGGAATTTTTATAATCCAACGAATGAAAGTTGTTTTATCAAGCTTGCAAAAGTTGATAAGTTGGTTGATGGGATAAACATTTACAACATCCTAGAACCATGCTATCATGCCACAGAGGCAGTGAATATTACAGAATCCTATATTAGGTTGCCATCTAGCTTCCGGAAGTTGGGTGAGACTGAAAAACCTTTCCCAGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTAAGAGCACCTGTGAGAGATGGAATTGTACCAACTTGGCCACAGCTGATGGATTTGCAGCTTTCTCCACCATGCACGGACGATGAGGTTGCAAACGCATGGTTGAACGATGAAGCAGTCAGGACAGCAATTCATGCAGCACAGAAAAGTGAAGTCAGTAGTTGGGATATATGCACAGACAGAATTACCTTTGATCATGATGCTGGGAGCATGATCAACTACCACAAGAACTTAACTTCCAAAGGTTATAGAGCCCTTATATTCAGTGGTGATCATGACATGTGTGTACCATATACGGGGAGTCAGGCCTGGACAAGATCGATTGGATACAAGATTGTTGATGAATGGAGGCCATGGTCTTCCAATGGTCAAGTTGCTGGGTATACACAAGGATATGACAAAAATCTTACTTTTCTGACCATAAAGGGATCTGGGCATACTGTTCCTGAATATAAACCAGTAGAGGCATTGGACTTTTACAAACGCTTTTTGGCTGGAATTCCAATCTGA 1494 0.4337 MESCRTMCLCLVLLQIFLCLVSTQSAPESATVTQVPGFSGTLPSKHYAGYVTVGENHGKNLFYYFVESQGKPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTKGGLPTLHLNPYSWSKVSSVIYLDSPAGVGFSYSKNATDYITGDTKTASDSHDFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLASEVVKGIEAGVEPKLNFKGYMVGNGVTDEQFDGNALIPFVYGMGLISDDLFKEVNSECNGNFYNPTNESCFIKLAKVDKLVDGINIYNILEPCYHATEAVNITESYIRLPSSFRKLGETEKPFPVRKRMFGRAWPLRAPVRDGIVPTWPQLMDLQLSPPCTDDEVANAWLNDEAVRTAIHAAQKSEVSSWDICTDRITFDHDAGSMINYHKNLTSKGYRALIFSGDHDMCVPYTGSQAWTRSIGYKIVDEWRPWSSNGQVAGYTQGYDKNLTFLTIKGSGHTVPEYKPVEALDFYKRFLAGIPI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01800 497 FunFam Carboxypeptidase 352 496 - -
Phco1g01800 497 FunFam Carboxypeptidase 25 309 - -
Phco1g01800 497 Pfam Serine carboxypeptidase 36 493 IPR001563 GO:0004185|GO:0006508
Phco1g01800 497 FunFam Carboxypeptidase 399 494 - -
Phco1g01800 497 SUPERFAMILY alpha/beta-Hydrolases 31 496 IPR029058 -
Phco1g01800 497 Gene3D alpha/beta hydrolase 24 318 IPR029058 -
Phco1g01800 497 Gene3D - 349 496 - -
Phco1g01800 497 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Phco1g01800 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Phco1g01800 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Phco1g01800 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Phco1g01800 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Phco1g01800 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 481 IPR001563 GO:0004185|GO:0006508
Phco1g01800 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01800 Phco-Chr1 57513523 57518369 Transposed