Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01782 ATGGATGTGAAAACAAAAAGGAGAGTTGATGTAGAGAATGGTGATGAAGGAGAAGACTTGGTTCTGGCTACTCTGGTTGCCAATGGAGATGACATTAGTCCTCTTGTGAGGCATGCCTTCGAAATGGGGCGCCCCATGGGGCTCCTACGCCAACTGGATTTTGTGGTGAAGAAAAAGGAAGCTGAAATTGAGGCAATGTGCAAGACACACTATGAGGAATTCATCCTTGCAGTTGATGAACTTCGTGGTGTGTTAGTTGATGCTGAAGAGCTCAAGAGTGAACTCCAAAGTGACAATTTCAAGTTGCAGCAGGTTGGCAGCACCCTTCTTGTGAAGCTTGAGGAGCTTTTTGTATCATATACAGTCAAGAAGAATGTGACTGAAGCTATAAAAATGTCAAAGAACTGTATGAAAGTGTTGGAGTTGTGTGTGAAGTGCAACAATCATATTTCTGAAGGCGAGTTTTATCCTGCATTGAAAACTGTTGATTTGCTTGAGAAGAATTACATAGAGAATATTCCTGCCAAGACTCTCAAAAAGGTGATAGAGAAAAGAATTCCTTCCATAAAGTCACATATCGAGAAGAAAGTATGCAGCCAAGTTAATGAATGGATGGTACAAATTCGAAGTTCTTGTAAAATAATTGGGCAAACGGCAATTGGTCGTGCTGCATCGAATCGCCAGAGGGATGAGGAAATGCTGGAAAGGAAGAGAAGGTCTGAAGGATTGAATATTTCAGTAGTTGATGATCAAACTTACACTTTGGTGGTTGAAGAAGATGAAGATTCTGCCATGAAATTTGATCTCACACCCCTCTATCGTGCTTGTCATATTCATAGTTGCCTTGGGATTCTAGAGCAGTTTCATGAATATTACTACAAGAATAGATTGTTACAATTGAATTCGGATTTGGAGATATCTTCAATGCAACCCTTTATTGAGTATTATCAGACATTTTTGGCTCAAATTGCTGGGTATTTCATTGTGGAAGATAGGGTCCTGAGGACTGGTGGTGGGCTCCTAGAACCTGATCAGGTTGAAACTATGTGGGAAACTGCTTTAGCAAAAGTAACGTCAATGTTAGATGTGCAATTCTCCCATATGAAATCTGCCACACATCTTCTCCTGGTTAAGGATTATGTTACACTTCTTGGGTCTACTCTTAGACAATATGGATATGACATTGGCCAGCTTCTTGATGTGCTTGATAATTGCCGTGACAAATACCATAGGCTTCTTTTGGAAGAATGTCGGAAGCAAATCGTTGAGGTTCTTGACAGTGACACATATGAGCAGATGGTGATAAAAAAGGATTCTGATTATGAGAATAATGTTCTGTCCTACAATCTTCAAACATCAGATATTATGCCTGCTTTTCCATATGTTGCATCATTCTCATCCATGGTACCTGATGCTTGTCGCATTGTGAGATCCTTCATCAAAGGCTCTATTGATTACTTATCTTATGGTCCACGTACCGGTTTCTTTGATGTTGTGAGGAAGTATTTGGACAAGCTCCTGATTGAAGTATTGAATGAATCTTTGCTTGACATCATCAATAGTGCAAGTATCTCAGTGTCTCAGGCCATGCAGCTTGCTGCAAACATAACTGTTCTTGAAAGAGCTTGTGATTTTTTCCTTCGACATGCAGCTCATCAGTGTTGCATACCCGTTCGAACAGCTGAGAAGACCCAAGCTAATTTGACTGCAAAGGTATTACTGAAAACTTCGAGGGATGCAGCTTATATTACTCTGCTGAGTTTGGTCAACACAAAGTTAGATGAGTATATGAATCTTATAGAATGTATCAACTGGACTACAGAGGAGACAAAGACAAGTGGAAATGACTACATAAATGAAGTGATATTTTACCTAGACTCACTTATGTCCACAGCACAACAGATTTTACCCCTAGATGCTATGTACAAGGTTGGGACCAGTGCACTTGAGCATATTTCCAACACAATTGTGGGAGCTTTCCTTAGTGATAATATCAAAAGGTTTAATGCAAATGCAGTTATGAATATCAACAATGATGTTAAAATGTTGGAGAATTTTGCAGATGACCGGTTTTATTCTTCCGGTCTGTGTGAAACTTATGCAGGAGGTGGTTTTAAGAGCTGTCTGATAGAAGCACGACAGTTAATCAATCTTCTGTCAAGTAGTCAGCCTGAGAACTTCATGAATCCTGTTATAAGGGAGAAAAATTACTATGCACTGGATTATAAGAGGGTAGCATCCATTTGTGAAAAATTCAAGGATTCTGCAGATGGAATCTTTGGAAGTCTTTCAAATAAAAACACAAAGCAAACTGCTAAAAAGAAATCAATGGACATGCTCAAAAAGCGACTAAAGGATTTCAATTGA 2367 0.3937 MDVKTKRRVDVENGDEGEDLVLATLVANGDDISPLVRHAFEMGRPMGLLRQLDFVVKKKEAEIEAMCKTHYEEFILAVDELRGVLVDAEELKSELQSDNFKLQQVGSTLLVKLEELFVSYTVKKNVTEAIKMSKNCMKVLELCVKCNNHISEGEFYPALKTVDLLEKNYIENIPAKTLKKVIEKRIPSIKSHIEKKVCSQVNEWMVQIRSSCKIIGQTAIGRAASNRQRDEEMLERKRRSEGLNISVVDDQTYTLVVEEDEDSAMKFDLTPLYRACHIHSCLGILEQFHEYYYKNRLLQLNSDLEISSMQPFIEYYQTFLAQIAGYFIVEDRVLRTGGGLLEPDQVETMWETALAKVTSMLDVQFSHMKSATHLLLVKDYVTLLGSTLRQYGYDIGQLLDVLDNCRDKYHRLLLEECRKQIVEVLDSDTYEQMVIKKDSDYENNVLSYNLQTSDIMPAFPYVASFSSMVPDACRIVRSFIKGSIDYLSYGPRTGFFDVVRKYLDKLLIEVLNESLLDIINSASISVSQAMQLAANITVLERACDFFLRHAAHQCCIPVRTAEKTQANLTAKVLLKTSRDAAYITLLSLVNTKLDEYMNLIECINWTTEETKTSGNDYINEVIFYLDSLMSTAQQILPLDAMYKVGTSALEHISNTIVGAFLSDNIKRFNANAVMNINNDVKMLENFADDRFYSSGLCETYAGGGFKSCLIEARQLINLLSSSQPENFMNPVIREKNYYALDYKRVASICEKFKDSADGIFGSLSNKNTKQTAKKKSMDMLKKRLKDFN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01782 788 FunFam Exocyst complex component 577 727 - -
Phco1g01782 788 Pfam Exocyst complex subunit Sec15-like 441 752 IPR046361 -
Phco1g01782 788 PIRSF Sec15 1 788 IPR007225 GO:0006886|GO:0090522
Phco1g01782 788 FunFam Exocyst complex component 395 563 - -
Phco1g01782 788 Coils Coil 78 98 - -
Phco1g01782 788 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 577 727 IPR042044 -
Phco1g01782 788 Coils Coil 777 788 - -
Phco1g01782 788 PANTHER SEC15 12 786 IPR007225 GO:0006886|GO:0090522
Phco1g01782 788 Gene3D - 395 568 IPR042045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01782 Phco-Chr1 57280786 57283152 Dispersed