Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01733 ATGATGGTTGAAGTTGAAGATGATAAAAGCAAATGGAGTGATGCTACTGAACTTTTGAGAAAATGGGGTTGCAGTGAGGACGATTTGGTGAGAATATTCTCGCGCTGTCCCTCGTTGCCCAATGCTGATCCCACGCAGGTCCAATCTAAACTGTGCCTGCTTAGTGATTTGGGCTTGTGTGCTTCTGAACTTGTGAAGATTGTCAATTGTAGACCAAGGTTTTTCCGGTCTCGGATTAACTCTTATTTAGAAGAGAGGATTGGACATCTTACATCATTGTTTGAGTCCAGGGAAGTGCTTCAGAAGGCCATTGTAAGGAACCCTTCATTGCTGCTATCGGATGGTCGCTGTAATGTTAAGGCCACAGTTGAGCTCTATGAGAAGTTGGGTGTTAAGAAAGGGGACTTGATTCAGATGCTACTTTTGCGGCCCACGGTTATTTCAAGGACTTCCTTTGATGCTGAGAAGCTGGAATATTTAAGCAGGACTGAGCTTACTGTGGATTCAAAGATGCAAAAATATGTGGTAACTTTAATTGGAATCTCTCGCGTGGAAACTATCCGGGAGAAGGTGGCGAATTTTGAAAAGTTTGGGTTTTCTGAAGAGGAGATATTTGGTCTTGTGGGGAGGTCTCCTAATGTTTTGACATTGTCGACAGACAAGGTTCAGAGGAACATGACTTTCATTTTGGGCACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCAGCCGTATCTATTGTATGCCAATGTGGATACTGTTTTGAAGCCAAGAGTTCTACTAGCACTGAAGTTCAAGATATGGATTCAAAGTGGCAGATCATAG 825 0.4291 MMVEVEDDKSKWSDATELLRKWGCSEDDLVRIFSRCPSLPNADPTQVQSKLCLLSDLGLCASELVKIVNCRPRFFRSRINSYLEERIGHLTSLFESREVLQKAIVRNPSLLLSDGRCNVKATVELYEKLGVKKGDLIQMLLLRPTVISRTSFDAEKLEYLSRTELTVDSKMQKYVVTLIGISRVETIREKVANFEKFGFSEEEIFGLVGRSPNVLTLSTDKVQRNMTFILGTMKLDAKMVLKQPYLLYANVDTVLKPRVLLALKFKIWIQSGRS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01733 274 PANTHER CGI-12 PROTEIN-RELATED 16 263 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 SMART mt_12 30 60 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 SMART mt_12 65 96 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 Pfam mTERF 69 260 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 Pfam mTERF 18 112 IPR003690 GO:0003690|GO:0006355
Phco1g01733 274 Gene3D Transcription termination factor 3, mitochondrial 95 269 IPR038538 -
Phco1g01733 274 FunFam Mitochondrial transcription termination factor family protein 83 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01733 Phco-Chr1 55785787 55788243 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco1g01733 mTERF 5.1e-27 No_clan