Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01659 ATGGAAAGTCGCCAGAGAATAACGCTTTATGACCAAATGACAGCTGGCAACGGCAATAACCGCAACAACAGCAGCAGCAGCAGCCGAGACTCACTAGCGAGCCTCATGCTCGACGACGTCGTATTCAATAAGACCGAAGCCGAAGCGAGCCGTGATCTGAGCCGAAGTCGGACTCTCCAAGACATCATTCGCGAAGAGAAACCTAACGGAGACGCGAAGGATCGCAACTCTTGGAAAGCCTTCAAGGAGAAGCTTCGGCTCAAGCGCGCTATCGGCTTGGCTTGGTCCTCCGCCACAAGTTACAGTAATAATAGCAATAATAACGACAATGATGATGGAATCTTACCTCAAATTCGCCTCCACTCGGACCACGCGGTGACTCAGCAGAACGACGTGGTTGTGGAGGACGCAGACGATTCAGATCCGATCGCACGGTTCGGATCTCCGACGGAGAACACGGCGGCCGGAGGCGATTCCTCCGAGGGGGAGAACAACCAGGAGGCGGCGGTTGGCGTGTCGTTGATGGATTTGTTGGAGGAAGCGGAGCAGGAACTGGATTTGTACAGAGTGAGCGATGATGATGTGGTGGCAGATTTTGAGAAGAGAGAAGAAGATGAAGAAGAAAAAGAGGGTTTGGTAGAGTACAACTGCTGCGTCTGCATGGTACGCCATAAAGGCGCGGCGTTTATCCCCTGCGGACACACCTTCTGCAGAATGTGCTCAAGGGAGATTTGGGCCAGCAGAGGGAATTGCCCTCTCTGCAATAATTTAATTTTGGAAATCCTTGATATTTTCTGA 798 0.5188 MESRQRITLYDQMTAGNGNNRNNSSSSSRDSLASLMLDDVVFNKTEAEASRDLSRSRTLQDIIREEKPNGDAKDRNSWKAFKEKLRLKRAIGLAWSSATSYSNNSNNNDNDDGILPQIRLHSDHAVTQQNDVVVEDADDSDPIARFGSPTENTAAGGDSSEGENNQEAAVGVSLMDLLEEAEQELDLYRVSDDDVVADFEKREEDEEEKEGLVEYNCCVCMVRHKGAAFIPCGHTFCRMCSREIWASRGNCPLCNNLILEILDIF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01659 265 ProSiteProfiles Zinc finger RING-type profile. 217 255 IPR001841 -
Phco1g01659 265 PANTHER OS01G0917900 PROTEIN 6 265 - -
Phco1g01659 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 265 IPR013083 -
Phco1g01659 265 Pfam Zinc finger, C3HC4 type (RING finger) 215 258 - -
Phco1g01659 265 SMART ring_2 217 254 IPR001841 -
Phco1g01659 265 SUPERFAMILY RING/U-box 216 261 - -
Phco1g01659 265 MobiDBLite consensus disorder prediction 139 164 - -
Phco1g01659 265 MobiDBLite consensus disorder prediction 1 30 - -
Phco1g01659 265 CDD RING-HC 217 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01659 Phco-Chr1 54526631 54527428 Dispersed/Wgd