Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01653 ATGGGTTTTCCAACCAGCATCAATCACTTTTTGAGTTTTTTGCTCCTATTTTCAAGCTTCTGTTTGGGTGTAAGTTCTGTGAATGATAGCATCACATCAACCAGATTCATCAGGGACTCTCAGACTATTAGCTCAAGCAACGGTGACTTCAAGCTTGGATTCTTCAGCCCTCAAAATTCTACACATCGCTATGTGGGAATCTGGTATCTCTCTCAAATCTACATCATATGGACAGCAAATAGAGATCAACCATTGATCAATGATTCATCTGGGGTGTTCAAAATTCACAAGGATGGGAATCTTGTGGTATTGAATGGACAAAATAGAGTGATGTGGTCAACAAATATGTCAGCTAGTGCTACCAACACAACTGCTCAACTTGACAATTCAGGAAATCTGATCCTTCGTGATGACTCAAGCTTAACAACATTATGGGACAGTTTCACACACCCTGCTGATATTGCTGTGCCATCGATGAAAATTGCGAGTAATAGGATCACTGGTGAGAAGATTGAGTATGTGTCATGGAAAAGCAGTTCTGATCCTTCTTCTGGGTACTTCACTGGGAGCCTTGAACGGTTGGATGCTCCAGAAGTGTTTTTTTGGTACAACAAAACAAAGCCATATTGGAGAACTGGTCCATGGAATGGAAGAGTCTTCCTTGGATCGCCAAGGATGTTAACTGAGTACTTATATGGGTGGCGTTTTGAGCCAAATGATAACGGAACTGCTTATCTAACCTACAATTTTGAAAAACCAGCCATGTTTGGAATCCTTACCATAACTTCACGAGGGACACTAAAACTGGTAGAGTTTTTGAACAGAACGATCTTTCTGGAACTTGAGGTGGATCAGAATGAATGTGACTTTTATGGGAAGTGTGGGCCCTTTGGAAGCTGTGATAACTCCACCTTACCAATTTGCAGCTGTTTAGAGGGGTTTGAGCCAAGCAAGCCAGTGGAATGGAACAGCAAAAATTGGACAAGTGGGTGTGTGAGGAATGTGGCACTGAATTGTGGCAAGTTGAGAAATGTGAGTGATCAAGTTGAAGAAGATGGTTTTTTGGAGTACCATAATATGAAAGTGCCTGACTTTTCAGAGAGATCAGATGGAAACCAAGACAAATGTGGAGCAGATTGCTTGGCAAATTGCTCTTGCTTGGCATATGCATATGATTCTTATATTGGTTGCATGTACTGGAGTAGAGAGTTGATTGATTTGCAGAAATTTCCTAGTGGAGGGGTTGATCTCTTCATTCGTGTGCCATCACAGCTTCTACGTGGTAAGAAGGGAAGAAAATACAAGGTATTAATCATTGGCATTATGGGGGCAATTGGAGCATTAGCAACTGCAATCAGTGCTTATCTTTTGTGGAGGAAATTTACACCTAAGCATACAGGAAGTGTGCTTCAAGATGAGATTAGCGGAAAGAAAAAGGAAATTACTACTAAATTGGAAGAGCTGCCACTATTTAAATTTGAAAAGCTTGCAAATGCTACAAACAACTTTCACTTTGGTAATATGCTTGGAAAGGGAGGTTTTGGTCCTGTATACAAGGGACACTTGGAAAATGGACAAGAAATTGCTGTAAAAAGACTTTCAAAAACTTCTGGACAAGGATTAGAAGAATTCATGAATGAAGTGGTAGTGATTTCTAAACTTCAACATCGAAATCTAGTAAGACTTCTTGGATGTTGCATTGAAGGAGAGGAACAAATGTTGGTATATGAGTTTATGCCAAATAAAAGTTTGGATTCATTTCTCTTTGATCCACTTCAAAGAAAAGTTTTAGATTGGAAGAAGCGCTTTAACATAATTGAAGGAATAGCACGAGGAATACTTTATCTTCATCGAGATTCAAGACTAAGAATTATACATAGAGATCTTAAAGCAAGTAATATCTTATTGGATGATGATATGAATCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAGAGGAGGTAATGATGATGAAGCTAACACAAAAAGGGTTGTTGGAACTTATGGTTATATGCCTCCTGAATATGCAATGGAAGGACTTTTTTCAGAAAAATCAGATGTGTATAGCTTTGGAGTATTATTACTAGAGATTGTAAGTGGACGAAGAAATACTAGCTTTCATAATGATGAACAGTCACTTAGTCTCGTTGGATTTGCATGGAGACTATGGAATGAAGGCAACATTATAACTATAATAGATCAAGAGATATGGGATCCAGTTTTTGAAAAAAGTATGTTGAAGTGCATACATATAGGACTTCTATGTGTTCAAGAACTTACAAAAGAAAGACCATCCATATCAACTGTGGTTTTGATGCTTATAAGTGAGATTACACATCTTCCTCCTCCAAAGCAAGTTGCATTTGTTCAAAAACAAAATTATCAGAGTTCAGAGTCTTCTCAAAAAAGTCAATTTAACTCAAACAACAATGTGACTCTAAGTGAAGTCCAAGGTAGATAA 2466 0.3808 MGFPTSINHFLSFLLLFSSFCLGVSSVNDSITSTRFIRDSQTISSSNGDFKLGFFSPQNSTHRYVGIWYLSQIYIIWTANRDQPLINDSSGVFKIHKDGNLVVLNGQNRVMWSTNMSASATNTTAQLDNSGNLILRDDSSLTTLWDSFTHPADIAVPSMKIASNRITGEKIEYVSWKSSSDPSSGYFTGSLERLDAPEVFFWYNKTKPYWRTGPWNGRVFLGSPRMLTEYLYGWRFEPNDNGTAYLTYNFEKPAMFGILTITSRGTLKLVEFLNRTIFLELEVDQNECDFYGKCGPFGSCDNSTLPICSCLEGFEPSKPVEWNSKNWTSGCVRNVALNCGKLRNVSDQVEEDGFLEYHNMKVPDFSERSDGNQDKCGADCLANCSCLAYAYDSYIGCMYWSRELIDLQKFPSGGVDLFIRVPSQLLRGKKGRKYKVLIIGIMGAIGALATAISAYLLWRKFTPKHTGSVLQDEISGKKKEITTKLEELPLFKFEKLANATNNFHFGNMLGKGGFGPVYKGHLENGQEIAVKRLSKTSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEEQMLVYEFMPNKSLDSFLFDPLQRKVLDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDDMNPKISDFGLARIVRGGNDDEANTKRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFHNDEQSLSLVGFAWRLWNEGNIITIIDQEIWDPVFEKSMLKCIHIGLLCVQELTKERPSISTVVLMLISEITHLPPPKQVAFVQKQNYQSSESSQKSQFNSNNNVTLSEVQGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01653 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 783 - -
Phco1g01653 821 Gene3D Phosphorylase Kinase; domain 1 477 578 - -
Phco1g01653 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 182 IPR036426 -
Phco1g01653 821 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Phco1g01653 821 Gene3D - 23 150 IPR036426 -
Phco1g01653 821 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Phco1g01653 821 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01653 821 Pfam PAN-like domain 350 407 IPR003609 -
Phco1g01653 821 CDD B_lectin 34 151 IPR001480 -
Phco1g01653 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Phco1g01653 821 PIRSF SRK 2 821 IPR024171 GO:0004674
Phco1g01653 821 MobiDBLite consensus disorder prediction 799 821 - -
Phco1g01653 821 Gene3D Transferase(Phosphotransferase) domain 1 579 787 - -
Phco1g01653 821 SMART ntp_6 349 421 IPR003609 -
Phco1g01653 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 148 - -
Phco1g01653 821 CDD PAN_AP_plant 335 422 - -
Phco1g01653 821 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Phco1g01653 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Phco1g01653 821 Pfam D-mannose binding lectin 75 177 IPR001480 -
Phco1g01653 821 CDD STKc_IRAK 509 775 - -
Phco1g01653 821 SUPERFAMILY Protein kinase-like (PK-like) 488 800 IPR011009 -
Phco1g01653 821 SMART blect_4 34 151 IPR001480 -
Phco1g01653 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 767 - -
Phco1g01653 821 SMART serkin_6 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01653 821 Pfam Protein tyrosine and serine/threonine kinase 504 772 IPR001245 GO:0004672|GO:0006468
Phco1g01653 821 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01653 Phco-Chr1 54447831 54452996 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco1g01653 PK_Tyr_Ser-Thr 7.9e-50 CL0016