Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01552 ATGAAAACTTCACTTCACTCCACTCTACTATGCTCCACTAATCCACTCTCTCACACCATGGACAATTTCTCTGCTTATCTGTCATGCTTTCTCCTCCTCCTTTTTCTCTCAGACGCACGTGCCGACCTCCCCGGCTCGTGGGAGATGCTCGTCCCTGACGCCGGCGTCGCCTCCATGCACACTGCCGTCACGCGCTTCAACACTGCCGTCCTCCTCGACCGGACCAACATCGGTCCCTCAAGAAAACTCCTTCCCAAGGGCCACTGCCGCTACGACCGGAACGATGCCGTCTTAAAGCGCGACTGCTACGCGCACTCCGTCCACCTCGACCTCGAAACCAACCAAGTCCGTCCTTTGAAAATCCTCACCGACACGTGGTGTTCCTCCGGTCAGTTCCTCTCCGACGGCACGCTGTTGCAGACTGGCGGCGACCTCGACGGGCTGAAAAAGATCCGATTGTTCAGCCCGTGTGACGCAACCGGGATGTGCGACTGGAAAGAGCTAGATGATGTGGAATTGGCGGAAGGCAGATGGTACGCCACTAACCAGATTTTACCGGACGGATCGGTAATTATAATCGGCGGAAGAGGCTCAAACACCGTCGAGTTTTTCCCTCCGCGCAAAAACGGTGCCGTTTCATTTCCCTTTTTGGCTGAAACGGAAGACACGCAGATGGATAACTTATACCCTTACGTCCACCTTCTTCCAAACGGTCACCTTTTCGTTTTCGCCAACACGCGGTCGGTGATGTATGACTTCACGCGCCACGTCATCATTAAGGAGTACCCTCAATTGGAGGGCGGTCCGCGGAACTACCCTTCCGCAGGGTCCTCCGCGATGCTGGCTTTACAAGGGGACTACTCAACGGCGGAGATTGTTGTATGTGGCGGCGCGCAATACGGTGCGTTTTTGCTGCGGAGTACGGACACCCCGGCGCACGGTAGCTGTGGGCGCATATCAGCTCTGGGGGAGAATGAGAATCCGAAATGGGAAATGGAGAACATGCCGTTCGCGAGAATAATGGGGGATATGGTGATGCTTCCAAACGGCGACGTTTTGGTTATCAATGGAGCTATGTCTGGGACACAGGGGTTTGAGTCGGCAAGTAATCCCTGTCTGAATCCCGTTCTGTACAGACCTGACCAACCGGTTGGGTTGCGGTTCATGGTTTTGAACCCTGGCACGGTTCCAAGAATGTACCATGCAACGGCCAATTTGTTACCCGATGGAAGGGTTCTTCTTGCAGGTAGTAACCCGCATGTTTTGTACCGGTTCGATGCTGAGTATCCGACCGAGTTACGAGTGGAAGCGTTTTCGCCGGAGTATTTGTCCCCGGACCGGGCCAATCTTAGACCAGTCATTCAGGAGATGCCCGAAACGGTGCGCTTTGGGGGGAGTTTCGATGTGGTGGTTTCGGTTTCTTTGCCTGTGGTAGGGATTGTGGAAGTGAATTTGGCGAGTGCCCCCTTCTCTACGCACTCGTTTTCGCAGGGTCAACGTTTGGTCAAACTTGCCGTTTCCTCTGCCGTACCGGACGGCGAAGGTAAGTACCGGGTCGGCGTGACTGCGCCACCAAGTGGGAAAGTGGCGCCGCCCGGGTATTACATGGCCTTCGCGGTGAACCAGGGCGTGCCCAGCGTTGCAAAGTGGATACACGTGGCGTAG 1665 0.5532 MKTSLHSTLLCSTNPLSHTMDNFSAYLSCFLLLLFLSDARADLPGSWEMLVPDAGVASMHTAVTRFNTAVLLDRTNIGPSRKLLPKGHCRYDRNDAVLKRDCYAHSVHLDLETNQVRPLKILTDTWCSSGQFLSDGTLLQTGGDLDGLKKIRLFSPCDATGMCDWKELDDVELAEGRWYATNQILPDGSVIIIGGRGSNTVEFFPPRKNGAVSFPFLAETEDTQMDNLYPYVHLLPNGHLFVFANTRSVMYDFTRHVIIKEYPQLEGGPRNYPSAGSSAMLALQGDYSTAEIVVCGGAQYGAFLLRSTDTPAHGSCGRISALGENENPKWEMENMPFARIMGDMVMLPNGDVLVINGAMSGTQGFESASNPCLNPVLYRPDQPVGLRFMVLNPGTVPRMYHATANLLPDGRVLLAGSNPHVLYRFDAEYPTELRVEAFSPEYLSPDRANLRPVIQEMPETVRFGGSFDVVVSVSLPVVGIVEVNLASAPFSTHSFSQGQRLVKLAVSSAVPDGEGKYRVGVTAPPSGKVAPPGYYMAFAVNQGVPSVAKWIHVA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01552 554 CDD E_set_GO_C 448 553 IPR015202 -
Phco1g01552 554 PANTHER SECRETED PROTEIN-RELATED 30 553 - -
Phco1g01552 554 FunFam Aldehyde oxidase GLOX 41 449 - -
Phco1g01552 554 Gene3D Immunoglobulins 450 554 IPR013783 -
Phco1g01552 554 Pfam Glyoxal oxidase N-terminus 59 297 IPR009880 -
Phco1g01552 554 Pfam Galactose oxidase-like, Early set domain 451 553 IPR015202 -
Phco1g01552 554 SUPERFAMILY E set domains 449 553 IPR014756 -
Phco1g01552 554 Gene3D - 42 449 IPR037293 -
Phco1g01552 554 SUPERFAMILY Galactose oxidase, central domain 106 445 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01552 Phco-Chr1 52668252 52669916 Transposed