Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01545 ATGTTTTGCCATCACACTGTGAGCCACCATTTTTTCTTCCTCTCCTTTACCTTTCTCTCATGCTCCCTCACACATAAACCCATCATGGCCACAGCCACCTTTCACAAGTGGCTCACTCATTTCACAGACACAAAGAAATGCAGCACATTCCTTCCTTCTCCTGCTTCCAAGGGACACCAAACTCTCTACTTCCACCACTACCATAGATATGTGTGTCAAGGATGCTGCTACCTTTCAATGAACGGTTGCAGAGAGGGACATGAGCAGCATGCAAGAACAAGGAAGCCAGTTGTTACCATAGAAACCAGAACGTTGGCAGCAGTTGCATCACCTGCAATGGCTATGTACAGTCTGAACATGGCCATTTCAGAGCTGAAATCGGAGGCTCCCTTTGGTACCTTGTCGGGCATAGTAAGGGTGCAGGTGCCGATTGAAGAGCAGGTTGAGGCCATCGATTGGCTCCATTCACAAAACCATCTTCTGCTTCCCCGTTGCTTCTTCTCTGGAAGGAAGCACAGTCCCAATGGTGAAGAAAACTTGGTGAGCGTTGCAGGGTTGGGTTCTGCTGTTTTCTTTTCCCAGCCACACCCCTTTTCCTACTGGGATTGGATTTCTATAAGGAGGTTTCTTTCTGAGAGATGCCCTTTAGTCCGTGCATATGGAGCTATCCGTTTCAATGCAGAAGCTAAGGTGTCATCAGAGTGGCTGGCTTTTGGTTCTTTCTACTTCATGATTCCTCAGGTTGAGTTCAATGAGCTTGAAGGAGGATCAATGCTTACCATAACTATTGCTTGGGATAATGATCTTTCTTGGTCATGGGAAAATGCAATCAATGCACTCCAAGAAACACTTCGCAATGTTTCTTCTTCCATTGTGAACTTTCCAAAAAGTACTCCTCCAACATTAATATTAAGCAGCCATAACATTCCTAGTAATGTAGACTGGGATCTTGCCGTTAATAGAGCTTTACAAATGATAGAGCGAAATGACTCCTTATTAACCAAGGTTGTGCTAGCACGTAGCACTAAAGTAGTGCCTACTGCTGATATTGATCCTCTTGCATGGTTATCTTGCTTAAAGGTTGAAGGTGAAAATGCATATCAGTTTTTACTTCAGCCACCAAATGCACCAGCATTCATTGGAAACACACCAGAGCAACTATTTCACAGAAAATGGCTCCACATTACTAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGAGCATCACAAGCACTAGATCGCCAAATTGAACTTGATTTACTTACTAGTCCAAAGGATGACATTGAGTTCACCATAGTGAGAGACACCGTAAGAAGAAAATTAGAGGCAGTATGTGAAAGGGTTGTGATTAAGCCAGAGAAAATGATAAGAAAACTTCCCAGGATTCAACATTTGTTTGCTCAATTATCTGGCAGGTTGAGAAGCGAAGAAGATGAGTTTGAAATTTTGTCATCTCTTCACCCTAGTCCAGCTGTTTGTGGGTTTCCAACAGAAGAGGCACAACTTTTAATTGCAGAAACAGAAGTATTTGATCGAGGGATGTATGCTGGACCAGTTGGTTGGTTTGGAGGAGGAGAGAGTGAATTTGCTGTAGGCATCCGGTCAGCATTGGTGGAAAAGGATAGGGGTGCATTTATATATGCTGGGACAGGGATTGTGGAAGGAAGCAGTCCTTATCTGGAGTGGGATGAGCTAGAACTCAAGACATCTCAGTTCACCAAGTTGCTCATGCTTGACTTGCCTCAGAGACTAAAAGTAGATTGTAAATGA 1770 0.4401 MFCHHTVSHHFFFLSFTFLSCSLTHKPIMATATFHKWLTHFTDTKKCSTFLPSPASKGHQTLYFHHYHRYVCQGCCYLSMNGCREGHEQHARTRKPVVTIETRTLAAVASPAMAMYSLNMAISELKSEAPFGTLSGIVRVQVPIEEQVEAIDWLHSQNHLLLPRCFFSGRKHSPNGEENLVSVAGLGSAVFFSQPHPFSYWDWISIRRFLSERCPLVRAYGAIRFNAEAKVSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWDNDLSWSWENAINALQETLRNVSSSIVNFPKSTPPTLILSSHNIPSNVDWDLAVNRALQMIERNDSLLTKVVLARSTKVVPTADIDPLAWLSCLKVEGENAYQFLLQPPNAPAFIGNTPEQLFHRKWLHITSEALAGTRARGASQALDRQIELDLLTSPKDDIEFTIVRDTVRRKLEAVCERVVIKPEKMIRKLPRIQHLFAQLSGRLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDRGAFIYAGTGIVEGSSPYLEWDELELKTSQFTKLLMLDLPQRLKVDCK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01545 589 NCBIfam isochorismate synthase 218 575 IPR004561 GO:0008909|GO:0009058
Phco1g01545 589 SUPERFAMILY ADC synthase 144 576 IPR005801 GO:0009058
Phco1g01545 589 PANTHER - 73 582 IPR044250 GO:0008909
Phco1g01545 589 Pfam chorismate binding enzyme 314 568 IPR015890 -
Phco1g01545 589 Gene3D Anthranilate synthase 114 578 IPR005801 GO:0009058
Phco1g01545 589 FunFam isochorismate synthase, chloroplastic-like isoform X1 114 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01545 Phco-Chr1 52512372 52519686 Dispersed