Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01540 ATGAACATGATTTCTATTATCTGTTTCAATTTTCACATTACTTTTGTGATTGTTCTTACACTTTTGGTACACATATCATCTCAGCTTGGTTCAAAGGTAGAAGTGCTTCCTGGGTTTGAAGGGCCTCTTCCTTTTGAACTCGAAACAGGGTATGTAGGATTGGGAGAAACAGATGAAGATAAGCAAGTGTTTTATTACTTTATCAAGTCAGAGAATGATCCTACAACAGATCCTCTTATGCTTTGGCTCACTGGAGGCCCTGGTTGCTCTTCATTTTCTGGTCTTGCTTTTCAAATAGGTCCGTTTGGATTCAAGAGTGAGGAGTATGATGGGAGCGTGCCAAATTTGGTCTTGAGGCCACAGCCCTGGACGAAGGTATGTAGCATTATTTTTGTAGATTTGCCTTTTGGAACTGGCTTCTCGTACGCAAAAAATCTCACTGCTAATAGGAAGGACTGGAAGTTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCAGAATTTCTTTCAAATGACTTTTACATGGGAGCTGATTCATATTCTGGCATACCTGCCCCTGCCATTGTTCAAGAAATTTCAAAGGGAAATGAAATAGGTCTTCAACCACAAATAAATCTCCAGGGATATCTACTAGGGAACCCCATGACAACACGCAAAGAAAAAAATGACGAAATCCCATTTGCTCATGGAATGGGGCTTATTTCTGATGAACTCTATGAGTCACTGAAGAGAAATTGCAAAGGAGAATACATAGATGTAGATTCTAGAAATGAATTGTGTTCAAGAGATCTCAACTACTATGATGAGTGCCTTTCAGGAATTAATGAATTCAACATTTTGGATCTCTATTGCCAAAATGATTCTACTAAGAATCATGAAGGTCCATGGAGAAGATCTCTGACTCAAAAGTTTGAGTCCTCTCTCAATTCTCATCTCAAGTTAGACACAAGATGCCAAATATATGGTTATTTCCTTGCCACTCAATGGGCCAATGATGAGAGTGTTCGCAAAGCACTGCACATTCGAGAGGGAAAAGGCAAATGGGAACGTTGTTGGCTTGGTGATTTTGAGTATGAGATCTCTAGCAGCTTCGAGTTTCATTTAAATCTCAGTGCTAAAGGATATCGTTCTTTAATATATAGTGGGGATCATGATGCAGTTGTTCCTTTCATGTCGACTCAAGCATGGATCAGAGCTCTAAACTACTCCATTGTAGACGATTGGAGGCCATGGCTTCTAGAAGGCCAAGTTGCAGGATACACAAGAACATACTCTAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACACACAGCTCCTGAGTACAAGCCTCTTGAAGGTTACGCCATGTTCAGTAGGTGGATAGCCAGTAAGCCTTTGTAA 1401 0.404 MNMISIICFNFHITFVIVLTLLVHISSQLGSKVEVLPGFEGPLPFELETGYVGLGETDEDKQVFYYFIKSENDPTTDPLMLWLTGGPGCSSFSGLAFQIGPFGFKSEEYDGSVPNLVLRPQPWTKVCSIIFVDLPFGTGFSYAKNLTANRKDWKLVHHTHQFLRKWLIDHPEFLSNDFYMGADSYSGIPAPAIVQEISKGNEIGLQPQINLQGYLLGNPMTTRKEKNDEIPFAHGMGLISDELYESLKRNCKGEYIDVDSRNELCSRDLNYYDECLSGINEFNILDLYCQNDSTKNHEGPWRRSLTQKFESSLNSHLKLDTRCQIYGYFLATQWANDESVRKALHIREGKGKWERCWLGDFEYEISSSFEFHLNLSAKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVDDWRPWLLEGQVAGYTRTYSNQMTFATVKGSGHTAPEYKPLEGYAMFSRWIASKPL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01540 466 FunFam Serine carboxypeptidase-like 11 27 466 - -
Phco1g01540 466 FunFam Carboxypeptidase 369 463 - -
Phco1g01540 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Phco1g01540 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Phco1g01540 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Phco1g01540 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Phco1g01540 466 FunFam Carboxypeptidase 322 465 - -
Phco1g01540 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 450 IPR001563 GO:0004185|GO:0006508
Phco1g01540 466 Pfam Serine carboxypeptidase 37 462 IPR001563 GO:0004185|GO:0006508
Phco1g01540 466 SUPERFAMILY alpha/beta-Hydrolases 36 465 IPR029058 -
Phco1g01540 466 Gene3D alpha/beta hydrolase 27 466 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01540 Phco-Chr1 52329675 52336582 Tandem