Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01530 ATGGATCGTACTGACAAGCAGCAGCTATCCTTGGTCAAGGGTACAAGGCAAAGATACAATGAATGGATTTTTCGAGATGTACCAAGTGATATAACAATAGAAGTGAATGGAGGAGCATTTTCATTGCACAAGTTTCCTCTTGTCTCCAGAAGTGGAAGAATAAGGAGGATAGTTGCAGAAAACAGGGATGATGATATCTCAAGAGTTGTGCTTAATAATCTACCAGGAGGTGCTGAATGCTTTGAGTTGGCAGCAAAATTCTGTTATGGTATTAACTTTGAGATTACATCCACAAATGTTGCTCAGCTATGTTGTGTCTCTGATTACCTTGAAATGACTGAAGACTTTTCAAAAGACAACCTTGGCTCGCGTGCTGAGGAATACCTTGAGAGTGTAGTTTGCAAGAATCTTGAAATGTGTGTTGAAGTCTTGCAACAATGTGAGAGCCTGCTTCCTCTTGCTGATGAGCTAAAAGTAGTTATCCGCTGCATTGATGCAATAGCTTCAAAAGCATGTGCAGAACAAATAGCCTCTAGTTTCTCAAGATTAGAGTATAGCAGCTCAGGCAGGTTACACATGAGTAGGCAAGCCAAATGCGATAGTGACTGGTGGATAGAAGATCTTTCTGTTCTGAGAATTGATATGTATCAAAGAGTCATAACGGCCATGAAATGCCGTGGGGTTCGGCCAGAGAGTATTGGTGCTTCCCTTGTGAATTATGCACAGAAAGAACTGACAAAGAAATCCAGTTTGTGGAATCCATCCAGCCAGACCAAGATTGATTCAGATTCCTCTATGCATGAAAAGCTTGTGGTTGAGACCATTGTTAGCCTTTTGCCTGTGGAGAAACTTGCTGTTCCAATCACTTTCCTTTTCGGGCTTCTGCGAAGTGCAGTGATGCTTGATTGCACAATTGCTTCTAGACTTGACTTGGAAAGAAGGATTGGATCACAGCTAGATGTTGCCACCCTTGATGATATTTTGGTTCCGTCTTTCAAGCATGCAGGTGATACCTTGTTTGATGTTGACACAGTTCATAGAATTTTGGTAAATTTCTTTCAGCAGGATGATAGTGAAGAAGACCCAGAAGATGCATCTTTCTTTGAATCTGACAGCCCTCGTTCACCCTCCCAAACTGCACTAGTTAAAGTGTCAAAACTAGTGGACAACTACCTCGCTGAAATTGCCCCCGATGCAAACCTGAAACTTTCCAAGTTTTTGGTCATTGCAGAAACCTTGCCTGCACATGCCCGCACGGTTCATGATGCTTTATATCGGGCAATTGATATTTACTTAAAAGCTCACCAAGGTTTGTCAGATGTGGACAAGAAAAAGCTATGCAGATTGATTGATTTTCAAAAGCTTTCTCAAGAAGCTGGAGCACACGCTGCGCAAAATGAGCGCCTTCCTCTTCAATCAATAGTGCAAGTTCTGTATTTTGAACAGCTAAGACTTAGAAATTCTTTGTCCTGCTCCTTCGGGGAAGATGACCCCAAGCCAATACACCAGTCATGGCGCATAAGTAGTGGTGCACTGAGTGCAGCAATGTCTCCCCGAGACAACTATGCATCACTGAGACGCGAAAACCGTGAGCTTAAACTTGAATTGGCTCGACTAAGAATGAGACTAAATGATCTTGAGAGGGAGCATGCTTGCATGAAGAGGGACATGGCTAAGTCTGGATCGCGTAAATTTATGAGTTCTTTCTCCAAAAAAATTGGTAAGCTCAGTCTTTTTGGGCATAGTTCTTCTAGAGGATCAACTTCTCCATCCAAGAATTCTCATAGAACAGATTCAAAGGTGATTGAGAGAACCTGTGCTAGCACAGAGTAG 1833 0.4239 MDRTDKQQLSLVKGTRQRYNEWIFRDVPSDITIEVNGGAFSLHKFPLVSRSGRIRRIVAENRDDDISRVVLNNLPGGAECFELAAKFCYGINFEITSTNVAQLCCVSDYLEMTEDFSKDNLGSRAEEYLESVVCKNLEMCVEVLQQCESLLPLADELKVVIRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRQAKCDSDWWIEDLSVLRIDMYQRVITAMKCRGVRPESIGASLVNYAQKELTKKSSLWNPSSQTKIDSDSSMHEKLVVETIVSLLPVEKLAVPITFLFGLLRSAVMLDCTIASRLDLERRIGSQLDVATLDDILVPSFKHAGDTLFDVDTVHRILVNFFQQDDSEEDPEDASFFESDSPRSPSQTALVKVSKLVDNYLAEIAPDANLKLSKFLVIAETLPAHARTVHDALYRAIDIYLKAHQGLSDVDKKKLCRLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLRLRNSLSCSFGEDDPKPIHQSWRISSGALSAAMSPRDNYASLRRENRELKLELARLRMRLNDLEREHACMKRDMAKSGSRKFMSSFSKKIGKLSLFGHSSSRGSTSPSKNSHRTDSKVIERTCASTE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01530 610 MobiDBLite consensus disorder prediction 580 595 - -
Phco1g01530 610 Coils Coil 522 556 - -
Phco1g01530 610 SUPERFAMILY POZ domain 16 114 IPR011333 -
Phco1g01530 610 ProSiteProfiles NPH3 domain profile. 202 484 IPR027356 -
Phco1g01530 610 MobiDBLite consensus disorder prediction 578 610 - -
Phco1g01530 610 Pfam BTB/POZ domain 28 114 IPR000210 GO:0005515
Phco1g01530 610 MobiDBLite consensus disorder prediction 356 376 - -
Phco1g01530 610 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Phco1g01530 610 PANTHER OS12G0117600 PROTEIN 26 586 IPR043454 -
Phco1g01530 610 Pfam NPH3 family 202 459 IPR027356 -
Phco1g01530 610 Gene3D Potassium Channel Kv1.1; Chain A 10 130 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01530 Phco-Chr1 52098473 52101762 Transposed