Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01521 ATGCCCGGAGAGCCTCGCCCCTTGGAGATCCACCTCAGGGTCAACCCCAAGGGAAGCAACACCAACATGGTGCACCCTGTGACCGTGCAAACTCTGTCCCCGGTTCAGTACCGGAGAGAGGAAGTGAAGCATTACCGCAAGTGGTTCTCTTGGTTGATACCTCTCTTTGTTGTTGCTAACATAGTTTTGTTTGTGATCACTATGTATGTCAACAACTGCCCCCATAACTCTGTCTCCTGCATTGCCTCCTTCTTGGGTCGCTTCTCCTTCCAGCCCTTCAAAGAAAACCCCCTCTTAGGTCCTTCTTCATTGACGTTACAGAAGATGGGGGCTCTTGATGTGAGCAGAGTGGTTCATAGACACCAGGGGTGGCGCCTTATCTCTTGTATGTGGCTGCATGCTGGGGTTTTCCATCTGTTGGCAAATATGTTGGGTATTCTAGTAATTGGAATTCGGCTAGAGCAAGAATTTGGGTTTGTGCTTATTGGACTGCTATTTGTCATATCTGGATTTGGAGGCAGTTTGCTTTCTGCTCTTTTCATCCAGTCAAACATTTCTGTGGGCGCTTCTGGTGCACTTTTCGGCTTGCTGGGAGGCATGCTTTCAGAACTCATTACTAACTGGACTATATATGAGAACAAGCTAGCAGCACTCCTCACCCTTGTGATCATCATTGTTATCAATCTAGCAGTGGGAATTCTCCCACATGTGGACAATTTTGCTCATATTGGAGGCTTTCTTACAGGATTTCTTCTTGGATTTGTGTTTTTGATACGTCCCCAGTTCGGATGGGTTAACCAACGATATGCTCCCCTAAATTATTCTCCCGGACGAGCTAAGCCTAAATTCAAAAAATATCAGTGCATCTTATGGGTCTTCTCTCTCGTCATTCTTGTTGTTGGGCTTGCTGTTGGGCTTGCCGCACTTCTCCGTGGTGTTGATGCAAATGATCACTGCTCCTGGTGCCATTATCTGTCTTGCGTTCCAACTTCTAAATGGAGCTGCCATACAGAACCATCATATTGTGTGTCAAATCAGCTTGGTAACCAGCTGAACGTAACATGCTCAAGCAATGGTAAATCCAGTACATACTTCATGCAAGATCCAACCAGTTCCAAGATCCAGCAACTATGTACTCAACTTTGCAGTTGA 1152 0.4618 MPGEPRPLEIHLRVNPKGSNTNMVHPVTVQTLSPVQYRREEVKHYRKWFSWLIPLFVVANIVLFVITMYVNNCPHNSVSCIASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHRHQGWRLISCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWTIYENKLAALLTLVIIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRAKPKFKKYQCILWVFSLVILVVGLAVGLAALLRGVDANDHCSWCHYLSCVPTSKWSCHTEPSYCVSNQLGNQLNVTCSSNGKSSTYFMQDPTSSKIQQLCTQLCS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01521 383 PANTHER RHOMBOID-RELATED 42 335 IPR002610 GO:0004252|GO:0006508|GO:0016020
Phco1g01521 383 SUPERFAMILY Rhomboid-like 48 261 IPR035952 -
Phco1g01521 383 Pfam Rhomboid family 118 259 IPR022764 GO:0004252|GO:0016020
Phco1g01521 383 FunFam RHOMBOID-like protein 46 259 - -
Phco1g01521 383 Gene3D - 43 259 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01521 Phco-Chr1 51797473 51808207 Dispersed