Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01401 ATGGAGGGTCATCATCTCCATCGCCACCATGGGCAACAACAACAAAGGCTTCAGCCTCAGAATACGAGTGCCAACATGGATGTGACTGATAGGTTTCCCCAATGGAGCATCCAAGAGACTAAGGAGTTTCTCGTGATTCGTGCAGAGCTGGATCAGACTTTCATGGAGACTAAGAGGAACAAGCAGTTATGGGAAGTGATCTCAACAAGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTACAAGGGGTTTGAAACAATGGAGCAAGAAGCTACGAGGCAGCAATTTCCATTTTACAATGAATTCAATGCGATTTTCACAGCAAGGATGCAGAGAATGCTGTGGGCTGAAGCTGAGGGTGGATCGAAGAAGAACAAGGGGACGCAGCTCTCATCGGATGAAGAAGAAGATGGCAATGAAGAGAGTGCAGAAGCTGGTGGGGGAAGAAAGAAGAAAAAGGCAAAGATAGCTAGTGGGGGTGGTGGTGGTAGCAGCAGTTTGAACAGTTTGAAGGAGATTTTGGAGGAGTTCATGAGGCAACAGATGCAGATAGAAGCACAATGGATGGAAGCGTTTGAGGCAAGGGAAAATGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAGCCATGGAGGTGTTGGAGAATGAGAGGATAATGATGGAAGAAAGATGGAGAGAAAGAGAGGAACAAAGGAGGATTAGAGAAGAAGCTAGGGCTGAGAAGAGGGATGCTCTAATCACAGCTTTACTAAACAAGTTAGAGAGGCAAGAAATGTGA 816 0.4632 MEGHHLHRHHGQQQQRLQPQNTSANMDVTDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISTRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAEGGSKKNKGTQLSSDEEEDGNEESAEAGGGRKKKKAKIASGGGGGSSSLNSLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQEM 271
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01401 271 CDD GT1 33 96 - -
Phco1g01401 271 FunFam Zinc finger and SCAN domain-containing 20 35 96 - -
Phco1g01401 271 Pfam Myb/SANT-like DNA-binding domain 34 118 IPR044822 -
Phco1g01401 271 Coils Coil 180 200 - -
Phco1g01401 271 ProSiteProfiles Myb-like domain profile. 35 91 IPR001005 -
Phco1g01401 271 MobiDBLite consensus disorder prediction 1 22 - -
Phco1g01401 271 MobiDBLite consensus disorder prediction 132 180 - -
Phco1g01401 271 PANTHER FI21293P1 14 267 - -
Phco1g01401 271 Gene3D - 35 96 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco1g01401 Phco-Chr1 44884076 44885387 Dispersed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco1g01401 Myb_DNA-bind_4 8.2e-19 CL0123