Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01379 ATGGCTCCAAAACCTCTCTTTCGCCTTCTCATCTTTCTCACTCTCCTAGTTTCTTCCACTGCTTTTTCCTTCATATTCCATGGCTTCAATGAAAGCAATATCACCCTTGAAGCGAATGCACAGGTTGACAACCAAGGTAGACTTGAGCTTACCAGAAGAGAAAACAATATTGTTGGCCATGCATTCTATAACAAATCCATCAAAATACATAACAAAAATGCTTCATCCCTCCAGCCAAAAGTTTTTTCCTTTAGTACATGCTTTGTTTTCTCAATTGTGTCACCAAGCTCTGGCCCTGGTGGTTTTGGTCTTGCCTTCACCATAGCTCCTTCAACACAATTCCCAGAAGCTGAAGGTGGCCATTTTCTTGGTCTTTTCAACTCTGATAATGATATGAAGTCCTCAAATCATATCTTTGTGGTTGAGTTTGATACAGTGAACGGCTACAAAGATGCCACTGACACTGTAGGAAACCATGTGGGGGTGAACAAAAATGGCATGTCCTCAAATATATCTGAGCCTGCCGCTTACTATAAAGATGGCAAAAAGGAAGAGTTCAACATGGAGATGGCTGATGCTGTTTGTGCTTGGATTGAATATGATGGTGAAACAGAAATACTGAATCTCACAATAGCCTCTTATTTGGAACCAAAACCTAGCAAACCACTTATATTCGAGGCTGTTGACATCAAGTATGTTATGAAGGACAGCATGTTTTTCGGTTTCTCTGCGTCAACAGGTAACAGCAAAGCAAGTGCCCATTATATTCTGGGGTGGAGCTTTGCATTGAATGGGGTTGCCCCTCCACTAGATGCTTCACTACTTCCAAAGCCACCCCCAAAGGAGAAAGACTCACCCTCTTTTCCTTGGATAAAGGTTTTAATTGGCATCTTGGGTGCTTTGACATTTACCTTGTTGTGCCTTTTGTTTTTTGTAACACTCCATAAGAGATGTATGGAATTTGAAACTCTTGAGGACTGGGAGATGGATTGTCCTCATAGGTTCAGATATAGAGATCTTCACCTAGCAACAAAGGGGTTCATAGAGAGCCAACTAATTGGAGTTGGAGGCTTTGGTTCTGTGTACAAAGGGGTGTTACCCAGCACAGGAACTGAGGTTGCTGTTAAAAGGATCCTGAGAAGTCCAGCCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTGAACCTTCAAGGGTGGTGCAAGCACAAGAATGATCTTCTCCTAGTTTATGATTACATTCCGAATGGGAGCCTTGACTCTCTCCTATTCAACAAAAACTTTGTTTTGGATTGGGACCAGAGATTCAAAATTCTTAAAGGTGTAGTTGCTGGGCTGTTGTATCTTCATGAAGAATGGGAGCAAGTGGTGATCCATAGAGATGTGAAATCTAGCAATATTCTTATTGACGGAGACTTCAATGCTCGTTTGGGTGACTTTGGACTAGCAAGACTTTATAGCCATGATCAAGTGTCACACACAACAAGTGTGGTTGGAACCATTGGATATATTGCACCAGAGTTAACTAGGACAGGAAAAGCATCTACAAGCTCTGATGTGTACGCATTTGGGGTCCTACTTCTTGAAGTGGTTGCTGGAACAAGGCCTGTAGGTTCATCAGGTCAGTTTTTCTTGGTGGATTGGGTTCTTGAAAATAGTCAACTGGGTCAGATTCTTGAAGTGGTTGATCCAAAGCTAGATTCAGTTTATGATGAAGAGGAAGCAGAGTTGGTTCTGAAAGTGGGTCTACTATGCACTCAAAACAAAGCTGAGTATAGACCCTCTATCGAACAAATTACTAGGTACCTAAACTTTGATGACCCTTTTCCTGACATCTCTGATTGGAGATACTATGATTCTCAAAGTAGCACAACAAGCTTTGGTTTTTTAGAAGCCATGTCTACGGGTAAGACGTCATCCTCGTACAGTTTAGCCTCCATTGACAAGAGTACAATGTCCACAGAAACTGGCAGATAG 2007 0.4195 MAPKPLFRLLIFLTLLVSSTAFSFIFHGFNESNITLEANAQVDNQGRLELTRRENNIVGHAFYNKSIKIHNKNASSLQPKVFSFSTCFVFSIVSPSSGPGGFGLAFTIAPSTQFPEAEGGHFLGLFNSDNDMKSSNHIFVVEFDTVNGYKDATDTVGNHVGVNKNGMSSNISEPAAYYKDGKKEEFNMEMADAVCAWIEYDGETEILNLTIASYLEPKPSKPLIFEAVDIKYVMKDSMFFGFSASTGNSKASAHYILGWSFALNGVAPPLDASLLPKPPPKEKDSPSFPWIKVLIGILGALTFTLLCLLFFVTLHKRCMEFETLEDWEMDCPHRFRYRDLHLATKGFIESQLIGVGGFGSVYKGVLPSTGTEVAVKRILRSPAQGMREFAAEIESLGRLRHKNLVNLQGWCKHKNDLLLVYDYIPNGSLDSLLFNKNFVLDWDQRFKILKGVVAGLLYLHEEWEQVVIHRDVKSSNILIDGDFNARLGDFGLARLYSHDQVSHTTSVVGTIGYIAPELTRTGKASTSSDVYAFGVLLLEVVAGTRPVGSSGQFFLVDWVLENSQLGQILEVVDPKLDSVYDEEEAELVLKVGLLCTQNKAEYRPSIEQITRYLNFDDPFPDISDWRYYDSQSSTTSFGFLEAMSTGKTSSSYSLASIDKSTMSTETGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01379 668 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Phco1g01379 668 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Phco1g01379 668 CDD lectin_legume_LecRK_Arcelin_ConA 22 265 IPR001220 GO:0030246
Phco1g01379 668 Pfam Legume lectin domain 23 274 IPR001220 GO:0030246
Phco1g01379 668 Gene3D - 19 268 - -
Phco1g01379 668 CDD STKc_IRAK 353 614 - -
Phco1g01379 668 SUPERFAMILY Protein kinase-like (PK-like) 330 624 IPR011009 -
Phco1g01379 668 ProSiteProfiles Protein kinase domain profile. 347 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01379 668 FunFam Lectin-domain containing receptor kinase VI.3 332 423 - -
Phco1g01379 668 Pfam Protein kinase domain 349 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01379 668 FunFam L-type lectin-domain containing receptor kinase S.4 424 625 - -
Phco1g01379 668 FunFam L-type lectin-domain containing receptor kinase V.9 21 266 - -
Phco1g01379 668 PANTHER - 28 615 - -
Phco1g01379 668 SMART serkin_6 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01379 668 Gene3D Transferase(Phosphotransferase) domain 1 424 623 - -
Phco1g01379 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Phco1g01379 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 280 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01379 Phco-Chr1 40215726 40217732 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco1g01379 Pkinase 1.3e-49 CL0016