Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01376 ATGGACACCAACATCGGATCCCTCGACTCGAGTAACCCCGCCAACAACGACGTCGGCTGTCCTCCCAACGGCACCGTTTCAGCCATCAAGAACTCCGTCCCCGCCTCCGCCATCTCCTCCTCTGAGGCCACGCTCGGCCGCCACCTCGCGCGCCGCCTCGTGCAGGTGGGGGTCACAGACGTTTTTTCCGTGCCCGGTGACTTTAACCTCACCCTCCTCGACCACCTCATCGCGGAGCCGCAACTCACCAACGTCGGATGCTGTAATGAACTCAATGCCGGGTACGCCGCCGACGGCTACGCGCGATGCCGGGGCGTCGGCGCGTGCGTGGTGACCTTCACAGTGGGGGGGCTTAGTGTGATCAACGCGATTGCCGGCGCGTACAGTGAGAACCTTCCACTGATTTGCATTGTGGGTGGCCCCAACACGAACGACTTCGGCACGAACAGGATCTTGCATCACACCATTGGGTTGTCAGATTTCAGCCAGGAACTCCGGTGCTTCCAAACTGTTACCTGCTACCAGGCTGTGGTGAATAACATAGAAGATGCTCACGAAATGATTGATACCGCGATCTCAACCTGTCTGAAAGAAAGCAAGCCCGTCTACATAAGCATAAGCTGTAACTTGCCTGGAATCCCTCACCCCACTTTCAGTCGTGAGCCAGTTCCATTTTCTCTGTCTCCCAGATTGAGTAACAAGCAAGGGTTGGAGGCAGCAGTGGAGGCAGCAGCAGAGTTCCTAAACAAGGCAGTGAAGCCTGTAATTGTGGGTGGTCCAAAACTGAGGGTGGCTAAGGCATGTGAGGCTTTTGTTGAGCTCGCTGATGCATGTGGCTATCCATTTGCTGTGATGCCATCAGCCAAGGGACTAGTCCCTGAGTACCACCCTCACTTCATTGGCACATTCTGGGGAGCTGTAAGCACTGCTTTCTGTGCTGAGATTGTGGAATCTGCTGATGCATACTTGTTTGCTGGCCCCATTTTCAATGACTACAGCTCGGTAGGGTACTCTCTCCTTCTCAAGAAGGAGAAGGCCATCATTGTGCAGCCGGACCGGGTTGTGATCTCAAATGGACCTGCATTTGGGTGTGTTCTCATGAAGGACTTCCTCAGAGAACTTGCAAAGCGTCTTCAGCATAACAACACAGCATATGAAAATTATGCCAGGATATTTGTCCCTGATGGAAAACCTCTGAAGGCTGAACCAAGAGAGCCGTTGAGGGTTAATGTGCTGTTTAAGCATGTTCAAGAAATGATGTCTGGTGATACTGCTGTGATTGCTGAGACAGGGGACTCCTGGTTTAACTGCCAAAAGCTGAAGTTGCCAAAAGGGTGTGGGTACGAGTTCCAGATGCAATATGGTTCAATTGGTTGGTCTGTTGGTGCAACTCTTGGTTATGCTCAGGCTGTTCCTAAAAAGCGAGTGATTTCTTGCATTGGTGATGGAAGCTTTCAGGTGACAGCTCAGGATATCTCCACAATGATACGAAATGAGCAGAAGTCCATCATCTTCCTGATAAACAATGGTGGTTACACAATTGAAGTTGAAATTCATGATGGGCCATACAATGTGATTAAGAACTGGAACTACACTGGCTTGGTTGATGCAATCCATAATGGTGAAGGGAAATGCTGGACTACTAAGGTCACATGTGAAGAGGAACTTATTGAAGCAATTCAGAATGCAACAGGAGACAAGAAAGATTGCTTATGCTTCATTGAGGTGATTGTTCACAAGGATGATACAAGCAAAGAATTGCTTGAATGGGGCTCAAGGGTCTGTGCTGCAAATAGTCGTCCACCTAATCCTCAGTGA 1818 0.5033 MDTNIGSLDSSNPANNDVGCPPNGTVSAIKNSVPASAISSSEATLGRHLARRLVQVGVTDVFSVPGDFNLTLLDHLIAEPQLTNVGCCNELNAGYAADGYARCRGVGACVVTFTVGGLSVINAIAGAYSENLPLICIVGGPNTNDFGTNRILHHTIGLSDFSQELRCFQTVTCYQAVVNNIEDAHEMIDTAISTCLKESKPVYISISCNLPGIPHPTFSREPVPFSLSPRLSNKQGLEAAVEAAAEFLNKAVKPVIVGGPKLRVAKACEAFVELADACGYPFAVMPSAKGLVPEYHPHFIGTFWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVISNGPAFGCVLMKDFLRELAKRLQHNNTAYENYARIFVPDGKPLKAEPREPLRVNVLFKHVQEMMSGDTAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAVPKKRVISCIGDGSFQVTAQDISTMIRNEQKSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVTCEEELIEAIQNATGDKKDCLCFIEVIVHKDDTSKELLEWGSRVCAANSRPPNPQ 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01376 605 CDD TPP_PYR_PDC_IPDC_like 47 208 IPR047213 -
Phco1g01376 605 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 451 576 IPR011766 GO:0003824|GO:0030976
Phco1g01376 605 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 44 211 IPR012001 GO:0030976
Phco1g01376 605 Gene3D - 398 590 - -
Phco1g01376 605 FunFam pyruvate decarboxylase 1 41 217 - -
Phco1g01376 605 Pfam Thiamine pyrophosphate enzyme, central domain 241 357 IPR012000 GO:0000287|GO:0030976
Phco1g01376 605 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 44 218 IPR029061 -
Phco1g01376 605 MobiDBLite consensus disorder prediction 1 21 - -
Phco1g01376 605 Gene3D - 40 216 - -
Phco1g01376 605 FunFam Pyruvate decarboxylase 1 231 393 - -
Phco1g01376 605 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 406 599 IPR029061 -
Phco1g01376 605 SUPERFAMILY DHS-like NAD/FAD-binding domain 230 384 IPR029035 -
Phco1g01376 605 PIRSF Pyruvt_ip_decrb 38 600 IPR012110 GO:0016831
Phco1g01376 605 PANTHER PYRUVATE DECARBOXYLASE 32 600 IPR012110 GO:0016831
Phco1g01376 605 FunFam Pyruvate decarboxylase 1 400 587 - -
Phco1g01376 605 CDD TPP_PDC_IPDC 406 588 IPR047214 -
Phco1g01376 605 Gene3D - 231 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01376 Phco-Chr1 39806765 39811249 Dispersed