Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01375 ATGCATGGGTTGTCCACTAAAAATGTGGAAATTGTGCACCACCAGGTCCACGTCTTCTACCGCCGGTCCACCTCTTCTGCTAAGCGCACCATGGTTGATTCCTTCACATTGATGATCAAACTCGCTTCAAGCCATTTTGTGCTCTTTTTCACCTTAACCCTTTTTCATCAATCATTTTACTTCACAAGAAATAAAGAATGGGTTGGAGAGGGTGAGGTGGGTGAGGTTGCTAAGGTGGGAGATGTAGACAACGGAGATGTTGCAGAGGCTCTTGACGGAGATAAGTCAAAGACAAAAGAGAACATTGAAAGGCAGCTACATGTTCTCGATGTGACTTTTGGATACATGGCCCCAGAATATGCTGTTGATGGACTATATTCAATCAAATCGGACGTTTTCAGCTTTGGTATTTTGTTGTTGGAGATTATATGTGGCAACAAAAATAGAGCTCTTTGTCATGGAAACCAAACTCTGAACCTTGTTGGTTATGATGGAGTGCAAGTCCATGTACTTGAAGAATCAGGTTTCTGGCAATATTTCTTTGTTAAGCTTTAG 555 0.4198 MHGLSTKNVEIVHHQVHVFYRRSTSSAKRTMVDSFTLMIKLASSHFVLFFTLTLFHQSFYFTRNKEWVGEGEVGEVAKVGDVDNGDVAEALDGDKSKTKENIERQLHVLDVTFGYMAPEYAVDGLYSIKSDVFSFGILLLEIICGNKNRALCHGNQTLNLVGYDGVQVHVLEESGFWQYFFVKL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01375 184 SUPERFAMILY Protein kinase-like (PK-like) 105 148 IPR011009 -
Phco1g01375 184 Pfam Protein tyrosine and serine/threonine kinase 105 161 IPR001245 GO:0004672|GO:0006468
Phco1g01375 184 Gene3D Transferase(Phosphotransferase) domain 1 68 174 - -
Phco1g01375 184 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 111 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01375 Phco-Chr1 39746876 39753935 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco1g01375 PK_Tyr_Ser-Thr 1.1e-08 CL0016