Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g01374 | ATGAATCTTGTGAGGAAGAAACCTAAATTTGTAGTCTTACCTCTCCTTCTGTTGAGACTCCGATTAGTCTTTGGGCAAGTAGTTTTGTCAAAGGGCTTAGTGCTCCGGGGTTCGAATTTGAAGATGGAGATGATGGACGAGGATGAAACTTCTGCACCCAGAGAGGGGAGGCCCGTTTTGGTGATCCTGGTGGGAGCACCTGGAAGTGGAAAATCCACCTTCGGTGAAGATGTAATGCGTTCCTCTATTCGCCACTGGGTTCGCGTCTGCCAGGACACTATTGGAAATGGTAAAGCAGGAACTAAAGCTCAATGCCTAAGCTGTGCAACTAGTGCATTGAAGGATGGGAAGAGTGTATTTATTGATAGGTGCAATCTTAACAGAGAACAGCGGTCAGAATTTATAAAGCTTGATGGTAGACTCCAAATAGATGTCCATGCAGTTGTACTTGACCTTCCTGCTAAGCTTTGTATTTCTCGATCAGTCAAACGAACTGGGCATGAAGGAAATTTACAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAACATAAAGAACTTCCCAAATTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAGAATGAGAATGATGTAAAAAATGCTATTAATACATACAGCTCACTTGGGCCACTGGATAGTCTTCCTCATGGCTGCTTTGGTCAGAAGAATACAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCACTTAGTGCTGCATCTACAACGAGTGGCACTGAAGACCCTACTTCCCATACTCTAAGGAAAAATAATTCCTACTGCAAAGATAAGGAAACACTTTCCTCAATTTCAGATAATGCCAACTTAGAGACAAAGGAAGTAGAAGGCCAAGAAGTTGGCTCTGCTGGTTACCATGCCAATCAAGTCTATCTGGATGATATACCCACTCTGGCATTTCCCTCTATTTCAACATCTGATTTCCAATTCAACCTTGAGAAGGCAGCTGATATTATTATCGAGAAGGTTGTGGAGTTCGCAAATAAGTTTAGGAATGCCAGACTTGTTCTTGTTGACTTGTCTCACAAGTCAAAGATTCTTTCCTTAGTTAAAGCCAGAGTCGTGGAAAAAAACATGGACACCCAAAAGTTTTTTACCCATGTTGGGGACATTACTCATCTTTATTCCAAGGGAGGTTTGCGATGTAATGCCATTGCTAATGCTGCCAACTGGAGGTTGAAACCTGGAGGTGGAGGTGTTAACGCAGCAATTTTTAATGCTGCAGGTCCTGAACTGGAGTCTGCAACAAAAGAAAAAGTAAAATCTCTTTCACCTGGGAATGCTGCTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTATCTAAATAATGATTATTATAAAGGCTGCAAAATTCTCCAAGATGCTTATAATTCACTTTTTGAAGGTTTTGCATCTATTGTGATGAACCAGCCAGGGATACCAGTGGGAAAAAGTGAAAACCTTGGAAGGAAGTCTTTGGACTTGCCGGTTTGGTCTGATTGTTCTTCCAGAAAATATTTTACAAGTACTGATCAAAAGAGTAAGAGAGGTGATGATCATGGATCAGAGAAAAGCAAGAAATGCAAGGGAAATCAGGATGGCTTAGGATTGGCCTTTACTAATTCTAAGGATGAAAAGGTAGATTCAGAGCATACAAGAACTGAGAGGAGCAGGAGTAAGGCTTGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGCATCCTGAACAGCATAAGGGTGACTTGCTTGAAATTTCCGATGATGTTGTTGTATTGAATGATATGTATCCAAAGGCACAGAAGCATGTTCTGGTGTTGGCACGAATTGGGGGTCTTGACTGCCTCGCTGATGTCCAAAAGGAGCACCTTCAGTTATTGAACAAGATGCATGGTGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGAACGAGAATGCTTCTCTGGTATTTCGCCTTGGATATCACTCGGCACCATCGATGCGACAACTACATTTACATGTCATTAGCCAGGACTTTGAATCAACACAATTAAAGAATAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGTGACTCGGTTGATGTAATGGATGAGATCTCTAGTGATGGGAAAGCAACATTGAAAGATGACGACAAGCTACTCTCGATGGAGTTGAGGTGCCACAGATGTAGAAGTTCCCATCCAAACATACCCCGGTTAAAATCTCATATCAGCAGCTGTCAATCCCCCTTTCCTGCTTACCTACTTCAGAATGGACGTTTAGTGAATGCTCCGGGGGAACCTCGCAACAGTGTCCCGTAG | 2421 | 0.4234 | MNLVRKKPKFVVLPLLLLRLRLVFGQVVLSKGLVLRGSNLKMEMMDEDETSAPREGRPVLVILVGAPGSGKSTFGEDVMRSSIRHWVRVCQDTIGNGKAGTKAQCLSCATSALKDGKSVFIDRCNLNREQRSEFIKLDGRLQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQHKELPKLSEGFNRITFCQNENDVKNAINTYSSLGPLDSLPHGCFGQKNTDSKIQVGIMKFLKKAEVPLSAASTTSGTEDPTSHTLRKNNSYCKDKETLSSISDNANLETKEVEGQEVGSAGYHANQVYLDDIPTLAFPSISTSDFQFNLEKAADIIIEKVVEFANKFRNARLVLVDLSHKSKILSLVKARVVEKNMDTQKFFTHVGDITHLYSKGGLRCNAIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKVKSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNYLNNDYYKGCKILQDAYNSLFEGFASIVMNQPGIPVGKSENLGRKSLDLPVWSDCSSRKYFTSTDQKSKRGDDHGSEKSKKCKGNQDGLGLAFTNSKDEKVDSEHTRTERSRSKAWGSWAQALHQIAMHPEQHKGDLLEISDDVVVLNDMYPKAQKHVLVLARIGGLDCLADVQKEHLQLLNKMHGVGLKWAEKFLNENASLVFRLGYHSAPSMRQLHLHVISQDFESTQLKNKKHWNSFNTAFFRDSVDVMDEISSDGKATLKDDDKLLSMELRCHRCRSSHPNIPRLKSHISSCQSPFPAYLLQNGRLVNAPGEPRNSVP | 806 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g01374 | 806 | FunFam | Transcription factor bHLH140 | 366 | 513 | - | - | |
| Phco1g01374 | 806 | FunFam | Transcription factor bHLH140 | 47 | 217 | - | - | |
| Phco1g01374 | 806 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 268 | 376 | IPR043472 | - | |
| Phco1g01374 | 806 | ProSitePatterns | HIT domain signature. | 689 | 707 | IPR019808 | - | |
| Phco1g01374 | 806 | Pfam | Macro domain | 408 | 490 | IPR002589 | - | |
| Phco1g01374 | 806 | MobiDBLite | consensus disorder prediction | 547 | 595 | - | - | |
| Phco1g01374 | 806 | FunFam | aprataxin isoform X2 | 601 | 781 | - | - | |
| Phco1g01374 | 806 | SUPERFAMILY | Macro domain-like | 316 | 360 | IPR043472 | - | |
| Phco1g01374 | 806 | Gene3D | - | 602 | 783 | IPR036265 | - | |
| Phco1g01374 | 806 | SMART | YBR022w_8 | 385 | 527 | IPR002589 | - | |
| Phco1g01374 | 806 | Pfam | C2HE / C2H2 / C2HC zinc-binding finger | 725 | 778 | IPR032566 | - | |
| Phco1g01374 | 806 | SUPERFAMILY | Macro domain-like | 366 | 512 | IPR043472 | - | |
| Phco1g01374 | 806 | MobiDBLite | consensus disorder prediction | 254 | 272 | - | - | |
| Phco1g01374 | 806 | ProSiteProfiles | Macro domain profile. | 373 | 552 | IPR002589 | - | |
| Phco1g01374 | 806 | Pfam | AAA domain | 60 | 186 | - | - | |
| Phco1g01374 | 806 | MobiDBLite | consensus disorder prediction | 547 | 568 | - | - | |
| Phco1g01374 | 806 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 377 | 520 | IPR043472 | - | |
| Phco1g01374 | 806 | Pfam | Scavenger mRNA decapping enzyme C-term binding | 609 | 720 | - | - | |
| Phco1g01374 | 806 | SUPERFAMILY | HIT-like | 598 | 764 | IPR036265 | - | |
| Phco1g01374 | 806 | MobiDBLite | consensus disorder prediction | 254 | 274 | - | - | |
| Phco1g01374 | 806 | Gene3D | - | 38 | 217 | IPR027417 | - | |
| Phco1g01374 | 806 | PANTHER | APRATAXIN-RELATED | 320 | 780 | - | - | |
| Phco1g01374 | 806 | MobiDBLite | consensus disorder prediction | 581 | 595 | - | - | |
| Phco1g01374 | 806 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 54 | 204 | IPR027417 | - |