Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01322 ATGAACAGTGGAATTGAAGTTCTTTCTCCAGCTTCTTACCTCCAAAGTTCCAATTGGTTGTTACAAGAAAGCTTGGGGACCAGGTGGACTCGACAGGAGAACAAGCTGTTTGAGAGTGCATTGGTTGTGTATGACAAGGACACTCCAGACCGTTGGCTGAAGGTGGCATCCTTGATTCCAAGTAAAACTGTCAATGATGTGATCAAACAGTATAGGGAACTGGAAGAAGATGTGAGTGTAATTGAATCTGGGTTTATCCCAGTGTCAGTGTACACTGCTGATTCCTTCACATTGGAGTGGGTCAACAATCAAGGATTTTGA 321 0.4361 MNSGIEVLSPASYLQSSNWLLQESLGTRWTRQENKLFESALVVYDKDTPDRWLKVASLIPSKTVNDVIKQYRELEEDVSVIESGFIPVSVYTADSFTLEWVNNQGF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01322 106 SUPERFAMILY Homeodomain-like 27 83 IPR009057 -
Phco1g01322 106 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 100 IPR043363 -
Phco1g01322 106 FunFam Transcription factor SRM1 21 88 - -
Phco1g01322 106 CDD SANT 28 74 IPR001005 -
Phco1g01322 106 Gene3D - 22 88 - -
Phco1g01322 106 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
Phco1g01322 106 SMART sant 25 77 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01322 Phco-Chr1 30949936 30950256 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco1g01322 None None None