Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01296 ATGGACGAGCACGCCGTGCATTTGGCCTTGGCGGCGCTCGTCGGAGCCTCCGTCGTGGCTGTGTCGGCGTACTACATGCACCGCAAGACGCTCGCGCAGCTGCTGGAGTTCGCGCGCACGGTCGAGCGTGAGGCTGAAGGCGGCGGCGGTTCAGACCCCGAATCACCGCCGACGCATTTGAAGAAGCGCCGGGGAACCTCGAGGAGGCGGGGAAACGGCGGGTACAGGCGTGTCTCGGCGTCGTTGCCTGACGTCACCTTGATCTCCGGCGGGTTTGACGGGGACGAAAAGCGGAACGGGCCGGTACACGTCGAGGGGATTCCGCCAGGGCTGCCGCGGTTGCACACACTCCGTGAAGGGAAATCAACACAATCTGGTTCCTTTAAGAGAAGCCTTTTAAGACCAACTTCTCCCAAGTCCCCTGTTGCAAGTGCTAGTGCCTTTGAAAGTGTAGAAGGATCAGATGATGAAGATAACATGACAGACAAAGATAAATTGGATACTGCATATTTGCTTACAAATGGGAATGCTGGGCCAGAAGGTAAAATCCCATTTGAGACTTTACCTAATCATGTTAATGCTAATGGAGAGCAGATGACAATTGCTCCAAGTATGATCCGTTCTCATAGTGTTTCTGGTGACCTGCATGGTGTGCAGCCTGACCCAATAGCAGCTGACATTCTGAGGAAAGAGCCAGAGCATGAAACTTTCACAAGATTGAAAATTACTCCTATTGAGGCTCCATCACCTGATGAAGTTGAAGCTTATGTGGTTCTTCAAGAATGCCTTGAAATGAGAAAAAGATATATTTTTAGAGAAGCCATCGCGCCTTGGGATAGAGAAGTTATATCTGACCCCAGTACACCCAAGCCTAACCCAGATCCATTTTTATACACTTCTGAAGGAAAATCTGATCATTACTTTGAAATGCAAGATGGGGTTATTCATGTATATCCGAACAGAGAAGCGAAAGAAGAGCTTTTTCCTGTTGCTGATGCAACTACATTTTTCACTGATCTTCATCATGTACTTCGAGTCATAGCAGCAGGGAATATAAGAACTTTATGCCATCACAGGCTCAATCTTCTAGAACAAAAATTCAATCTTCATTTGATGCTAAATGCGGATAGAGAATTTCTTGCTCAGAAAAGTGCTCCACATCGAGACTTCTATAATGTTAGAAAAGTTGATACTCATGTCCACCATTCAGCATGCATGAATCAGAAACATCTTTTGAGATTCATAAAGTCAAAGCTGAGAAAAGAGCCTGATGAGGTTGTAATATTTCGTGATGGGACATATCTAACCTTGAAGGAGGTTTTCAAGAGTTTGGATTTAACTGGATATGATCTCAATGTTGACCTTTTGGACGTTCATGCTGACAAGAGCACTTTTCATCGCTTTGATAAGTTTAATCTTAAATATAATCCTTGTGGTCAAAGTAGGCTAAGGGAGATATTTCTAAAGCAGGATAATCTCATTCAAGGTCGTTTTCTTGGTGAGGTGACTAAGCAAGTGTTTTCGGATCTTGCTGCCAGTAAATATCAGATGGCCGAATATAGAATATCAATATATGGTAGGAAGCAAAGTGAGTGGGACCAACTAGCCAGTTGGATAGTTAATAATGATCTGTATAGTGAGAATGTTGTTTGGTTGATTCAGCTTCCGCGGTTGTACAATGTGTACAAAGAAATGGGAATTGTGACATCATTCCAGAACATGCTTGACAATATTTTTATTCCACTTTTTGAGGTTACTGTCGACCCAGATTCACATCCACAGCTGCATGTTTTCTTGAAACAGGTTGTTGGGTTGGATTTGGTGGATGATGAAAGCAAACCAGAAAGACGGCCGACAAAACACATGCCTACACCTGATCAATGGACTAATGTGTTCAATCCGGCATTTTCATACTATGTCTATTACTGTTATGCAAATCTTTACACCTTAAACAAGCTTCGTGAATCAAAGGGAATGACAACAATCAAATTCCGTCCACATTCTGGAGAGGCTGGTGATATCGACCATCTTGCAGCAACCTTTCTCACGGCTCACAACATTGCACATGGAATCAATTTGAAAAAGTCTCCCGTGCTTCAATATTTATATTATTTAGCCCAGATTGGCCTGGCAATGTCTCCATTGAGCAATAACTCCCTATTCTTAGACTACCATCGGAATCCTTTTCCCATGTTCTTCTTACGGGGTCTGAATGTGTCACTTTCTACTGATGATCCTCTCCAAATTCACTTAACAAAGGAACCATTGGTTGAAGAATATAGTATAGCTGCTTCTGTGTGGAAGTTGAGCTCGTGTGATTTGTGTGAGATAGCCCGGAATTCGGTATATCAATCAGGTTTCTCACATGCTTTAAAGTCACATTGGATTGGTAAGGAGTACTACAAGAGAGGGCCAAATGGAAATGACATTCAGAGAACAAATGTTCCTCACATACGGTTGGAATTCCGTGATACGATTTGGAAGGAGGAGATGCAACAGGTTTATCTGGGCAAAGCAATCATTCCTGAAGAAGTAGAGAAATAA 2544 0.4347 MDEHAVHLALAALVGASVVAVSAYYMHRKTLAQLLEFARTVEREAEGGGGSDPESPPTHLKKRRGTSRRRGNGGYRRVSASLPDVTLISGGFDGDEKRNGPVHVEGIPPGLPRLHTLREGKSTQSGSFKRSLLRPTSPKSPVASASAFESVEGSDDEDNMTDKDKLDTAYLLTNGNAGPEGKIPFETLPNHVNANGEQMTIAPSMIRSHSVSGDLHGVQPDPIAADILRKEPEHETFTRLKITPIEAPSPDEVEAYVVLQECLEMRKRYIFREAIAPWDREVISDPSTPKPNPDPFLYTSEGKSDHYFEMQDGVIHVYPNREAKEELFPVADATTFFTDLHHVLRVIAAGNIRTLCHHRLNLLEQKFNLHLMLNADREFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFKSLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLGEVTKQVFSDLAASKYQMAEYRISIYGRKQSEWDQLASWIVNNDLYSENVVWLIQLPRLYNVYKEMGIVTSFQNMLDNIFIPLFEVTVDPDSHPQLHVFLKQVVGLDLVDDESKPERRPTKHMPTPDQWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIKFRPHSGEAGDIDHLAATFLTAHNIAHGINLKKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSSCDLCEIARNSVYQSGFSHALKSHWIGKEYYKRGPNGNDIQRTNVPHIRLEFRDTIWKEEMQQVYLGKAIIPEEVEK 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01296 847 Gene3D - 406 496 - -
Phco1g01296 847 SUPERFAMILY Metallo-dependent hydrolases 243 842 IPR032466 -
Phco1g01296 847 FunFam AMP deaminase 406 496 - -
Phco1g01296 847 MobiDBLite consensus disorder prediction 45 162 - -
Phco1g01296 847 ProSitePatterns Adenosine and AMP deaminase signature. 740 746 IPR006650 GO:0009168|GO:0019239
Phco1g01296 847 MobiDBLite consensus disorder prediction 118 144 - -
Phco1g01296 847 NCBIfam AMP deaminase 304 833 IPR006329 GO:0003876|GO:0032264
Phco1g01296 847 Gene3D - 306 830 - -
Phco1g01296 847 FunFam Probable amp deaminase 484 830 - -
Phco1g01296 847 Pfam AMP deaminase 244 834 IPR006329 GO:0003876|GO:0032264
Phco1g01296 847 PANTHER AMP DEAMINASE 156 837 IPR006329 GO:0003876|GO:0032264
Phco1g01296 847 CDD AMPD 336 831 IPR006329 GO:0003876|GO:0032264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01296 Phco-Chr1 27130964 27140727 Dispersed