Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01291 ATGGTCGGAAAAACCATGTCCATGGCGGCCACTTCGCGCGAAAAGCTTGCGAGTCTCGTCAACGCTGCCAAGTTGGCCACTGACATCCCCTCCAAGCTCGAATCCCTCCGCCAACTGCGCCATGAACTTCCCCCCGAAGATCCCGTCCTCCTCACTGAGTTCCTACCCTCACTCTTCCTCTTCCACTCGGATCGCTTCGGCCCCGTGCGCAAATTTGTCACCGAGATGTTTGGTGAGATTGGATTGAAGAACACGGAGTTCTTGTCTGACATTGTGCCTATGCTAATTGAGGTACTGGATGATGACACACCGGCAGTGGTTCGGCAAGCTCTTCAGTGTGGAATTCAGTTGTTTCGTGGCACACTTGAGAAAATTGTGGTTCAGGGTCTATACTCTAGTGATTTAGATGGTGCACTTGAATCTGGATGGGAATGGATGCTTAAATTCAAAGACAAAGTATACTCAATAGCTTTTCAACATGAATGTGGTGGTGCAAAGCTGCTGGCACTGAAGTTTGTTGAGGCAGTTATTCGTCTTTACACTCCTGTTCCTAGTGGTTCCTCAGAGCCCACTTCTCGTCAAGGAAAGCCTGTGGAATTTAATATATCATGGCTCAGGCGGGGTCATCCAGTACTCAATATTGGAGATTTGAAAATTGAAGCAAGCCAAAGTTTGGGTCTCTTGCTTGATCAACTCAGATTTTCATATGTGAAGTCCCTTAGTAACTCAGTTATCATTGTGCTGATTAAAAGTCTTTCAGCAATTGCAAATGAAAGGCCTGCATTCTATGGCCGCATCTTGCCAGTTTTGCTCAGTTTGGAACCTTCTAGCTCTGTCATTAATGGGTTTTGTGTGTCAGCTGCACATCTTGCTTTGAAGAATGCCTTTCTTACTTGCTCGAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCAGGGGCTTTGAAGGAAATACAGTCAGAAGGAAAGGCAGATCGGGTGTTCCACCTAATCTCAGCTAGTAATGGAAGCATGGAGAGAGAGAAGGATGATCAACCTGTTATCAAGGAAGAGGAACCTGCAATAAATTCTGATGATTCAGTACACAGTGATTTGTCAAGAAAACGATCTGGATCACAAATTGAAGGTGATTTAGCTGAAGATGTTCATGGAAAACGTGTCAGGACAACAATTGATGCTTTGGAAGAACCTAAGAAAGAGTTGGATGAACATACCATTTCCAACTCTCAGGATGAGACTCCTTCAAATGTACCAACATCTTCAACAGGAGATGCGGATAATGGGCCTGTACGGCAACTTGTTACCACATTTGGTGCTTTGATTGCTCAAGGTGAAAAAGCTGTTGGGCATCTTGAGATTCTCATCTCAAGTATTTCTGCTGACTTGCTAGCTGAGGTGGTGATGGCAAATATGCAAAACTTACCTCCAAGTTACCCTAATACTGAAGGAAATGAACAACTGCAAGACATTAGTATGATTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTGTAGCTGCTGTTATGTCACTTTCTAGTACTTTCCCACCAATAGCTTCCCTTCTTGATGCACAACAATCAGTTTCAAACGAGGCCGAGAAGTCACAAGGAGAGGAAGAAATTTCTGCGACTGCTGTAAATAGTGGTGCTGTTCATTCTGGCATGAATCTTGTATCTGAAAATGTACCATCTCCTACTGATTTTCCAACTTCTGATGCTAGTATACCTGGAGTAGAGAATGGTTGTACAACTATGCCTCCTGACATCCATGATGTTGGAAACTCAGAGAGTGGAATTCCTGGCCTGGATTCTTTTGGTTGTAGTGATGCCTTGTCAGAAACTTTTGCTCCTTCTTTATTGGCTTCCACTGAAGTGGGCCTAGAAGATGGCAGCCAAGACCAAGATACAAGTTTGGATCTGCGGTCACCCCTGAACTTAGCTCCATCAATATCCACAGATAGATCTGAGGAGCTGAGTCCAAAAGCGGCTGTTAGAGATGTCAATAGCTTGGTGTCATCAACAGCTACTTCAGTTGTGTTGCCTTCCCGTTTAGTCTTGCCAAAGATGATTGCTCCAGTTGTTGAACTTGAAGATGAACAAAAGGATCATTTGCAAAAGTCATGTTTTATGCGTATTATTGATGCATATAAGCAAATAGCTGCAGCTGGAGGCTCCAAAGTCTGTTTTTCGATACTTGCTTATTTAGGAGTTGAGTTTCCCTTAGAATTAGACCCATGGAAACTATTACAACAGCATATTTTGATTGATTACACTAGTCATGAGGGACACGAGTTGACATTGCGTGTCCTCTACAGATTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACTACTGCAGCTTCTGTATATGAAAAATTCCTCCTTACAGTGGCAGAAGCACTTAGAGATTCATTTCCACCTTCAGATAAATCATTAAGTAAATTGCTTGGTGAATCTCCTTATTTACCAAAATCAGTTCTGAAAATTTTAGAAAACATGTGTTCTCCGGGAAATGGGGATAGAGGTGAAAAGGAGTTACACTCACTGAATGCGGATAGAGTAACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTTAGGCCTCCCATCCGAGATACTTGCTTACAAATTGCTCTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGTATGAAGGCGATACGTCTGGTGGCAAATAAGCTTTATCCCTTGTCATCCATTTCTCAGCAAATAGAAGCTTTTGCAAAGGAAATGCTTTTCTCAGTGACAAGTGATGATGTGTTTGAATTAACTGATGCTGAAGGGTCCATTGCTGATTCACAAAAGGGACCTGATGTTGAAAAGGTTTCAAACGAACAATCATCATTGAGTGGCAGCACTAAAGATGTCTCAGATAATCGTCAATCATGCACATCTGAGAGTGTCTCACCAGATTCAGTTTCTGAGGCTCAGAGGTGCATGTCATTGTATTTTGCTTTGTGTACAAAGAAACATTCTCTCTTTCGCCAAGTATTTGTCGTCTATAGAAGCACATCAAAGGCAGTAAAGCAGGCAGTACATCGACAAATTCCAATACTAGTACGTACTATGGGCTCATCTTTGGATCTCCTTGAAACTATTTCGGATCCTCCAAATGGAAGTGAGAATCTTCTAATGCAGGTGTTGCATACACTTACAGATGGTACGATCCCTTCTAAGGATTTAATAAGCACTGTGAAAAGGTTGCATGATTCAAAACTCAAGGATGCAGAGGTTCTTATTCCAGTATTACCATTCCTATCGAATGACGAGGTAATACCGATTTTTCCTCACATTGTGAATCTTCCTTTGGAGAAATTCCAAACAGCACTTGGTCGCATATTACAGGGATCATCACAATCTGGTCCGGTGCTTTCTCCAGCTGAAGTTTTAATTGCAATTCATGGAATTGATCCTGAAAGGGATGGAATTCCCTTGAAAAAGGTGACAGATGCATGCAATGCTTGTTTTGAGCAGCGACAAACTTTTACGCAGGAAGTTATTGCCAGAGTTTTGAATCAGTTGGTTGAGCAAATTCCTCCTCCTTTACTATTCATGCGTACAGTGTTACAAGCAATTGGTGCTTTTCCAACGCTGGTGGACTTTATCATGGGGATTCTTTCTCGCCTTGTGACAAAGCAGATATGGAAATACCCGAAGTTATGGGTGGGATTCTTGAAGTGTGTGCAGCTGACAAAACCACAGTCATTTGGTATTTTGCTTCAGCTGCCTCCAGCACTATTAGAGAATGCATTAAATAGAATTTCAGCCTTGAAGGCACCATTGATGGCTCATGCTAGCCAGCCAGATATACAATCTAAACTTCCGAGGGCTATGCTGGTTGTTCTTGGAATTGCATCCGATTCTCAGGTTTCAAGTCAAGCACAAACTACTCAGACACAGACTAGTCAAACACAGACTACTCAGACACAGACTAGTCAAACACAGACTAGTCAAACACAGACTATTCAGACACAGACTAGTCAAACACAGACTTCTCAGACACAAACTAGTCAAACACATACTGGTGAGACATGCAACTCAGACAAGGACACAGTGACAGAAAAATCTAAAGAATCATCTGCCGCGAGCTAA 4137 0.4269 MVGKTMSMAATSREKLASLVNAAKLATDIPSKLESLRQLRHELPPEDPVLLTEFLPSLFLFHSDRFGPVRKFVTEMFGEIGLKNTEFLSDIVPMLIEVLDDDTPAVVRQALQCGIQLFRGTLEKIVVQGLYSSDLDGALESGWEWMLKFKDKVYSIAFQHECGGAKLLALKFVEAVIRLYTPVPSGSSEPTSRQGKPVEFNISWLRRGHPVLNIGDLKIEASQSLGLLLDQLRFSYVKSLSNSVIIVLIKSLSAIANERPAFYGRILPVLLSLEPSSSVINGFCVSAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEIQSEGKADRVFHLISASNGSMEREKDDQPVIKEEEPAINSDDSVHSDLSRKRSGSQIEGDLAEDVHGKRVRTTIDALEEPKKELDEHTISNSQDETPSNVPTSSTGDADNGPVRQLVTTFGALIAQGEKAVGHLEILISSISADLLAEVVMANMQNLPPSYPNTEGNEQLQDISMIGSDDKAKYPPSFVAAVMSLSSTFPPIASLLDAQQSVSNEAEKSQGEEEISATAVNSGAVHSGMNLVSENVPSPTDFPTSDASIPGVENGCTTMPPDIHDVGNSESGIPGLDSFGCSDALSETFAPSLLASTEVGLEDGSQDQDTSLDLRSPLNLAPSISTDRSEELSPKAAVRDVNSLVSSTATSVVLPSRLVLPKMIAPVVELEDEQKDHLQKSCFMRIIDAYKQIAAAGGSKVCFSILAYLGVEFPLELDPWKLLQQHILIDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYEKFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDRGEKELHSLNADRVTQGLSAVWSLILLRPPIRDTCLQIALQSAVHHLEEVRMKAIRLVANKLYPLSSISQQIEAFAKEMLFSVTSDDVFELTDAEGSIADSQKGPDVEKVSNEQSSLSGSTKDVSDNRQSCTSESVSPDSVSEAQRCMSLYFALCTKKHSLFRQVFVVYRSTSKAVKQAVHRQIPILVRTMGSSLDLLETISDPPNGSENLLMQVLHTLTDGTIPSKDLISTVKRLHDSKLKDAEVLIPVLPFLSNDEVIPIFPHIVNLPLEKFQTALGRILQGSSQSGPVLSPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQTFTQEVIARVLNQLVEQIPPPLLFMRTVLQAIGAFPTLVDFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFGILLQLPPALLENALNRISALKAPLMAHASQPDIQSKLPRAMLVVLGIASDSQVSSQAQTTQTQTSQTQTTQTQTSQTQTSQTQTIQTQTSQTQTSQTQTSQTHTGETCNSDKDTVTEKSKESSAAS 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01291 1378 MobiDBLite consensus disorder prediction 411 432 - -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 945 985 - -
Phco1g01291 1378 SUPERFAMILY ARM repeat 34 1224 IPR016024 -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 559 578 - -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 955 985 - -
Phco1g01291 1378 Pfam Symplekin/PTA1 N-terminal 104 323 IPR032460 -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 1310 1361 - -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 632 662 - -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 1310 1378 - -
Phco1g01291 1378 Pfam Symplekin tight junction protein C terminal 1090 1268 IPR022075 -
Phco1g01291 1378 Gene3D - 2 348 IPR011989 -
Phco1g01291 1378 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 7 1326 - -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 335 433 - -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 339 410 - -
Phco1g01291 1378 MobiDBLite consensus disorder prediction 632 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01291 Phco-Chr1 23401945 23433198 Dispersed