Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01281 ATGGCAGAATCCGAGGAGAGAGCCTCGCTGACGTGGCGCAAAATCCCTGTCCTCAAATCTTCCCCCAACGACGTCGTCCCTCCGCTCCGAGACAGCGTCGTCGTCCTCCACTCCGCACCCGGCAGTGGCAAACGTTGTAATTTCGCGAGCGTGTCGGTGGCCGAAAGGAAATTCGACAGGGAATTCTCGCCGACGGCGGCTCAGCTTCTGCAGCACCCACTCGCGTTGGGGGCATTGGTGCCTAAAGACGCTGCTCTGTTCCTCGCTGCCGCCATCGCCGGCGCCGCAGCGAAATCCGTCACCGCCCCCCTCGACCGCATCAAGCTTCTTATGCAGACTCACGGCGTGCGAGTTGGACAAGAAAGTGCCAAGAGGGCGATTGGTTTCATTGAGGCTATAAATGTTATAGGGATGGAAGAAGGCATTAAAGGTTATTGGAAGGGCAATCTCCCCCAGGTGATCCGAGTTATACCTTACAGTGCTGTCCAGCTTTTTTCTTATGAATTTTACAAGAAAATATTCAAGGGAAAGGATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCTGGCATGACATCAACTTTTATCACTTACCCGTTAGATGTTCTAAGATTACGTTTAGCTGTTGAACCTGGTTATCGAACAATGTCAGAGGTCGCCTTGAGCATGCTAAGAGAGGAAGGATTTGCATCTTTTTACTATGGCCTTGGGCCTTCTCTCATTGGAATTGCTCCATATATTGCAGTGAACTTCTGTGTTTTTGATTTATTAAAGAAGTCATTGCCAGAGAAATATCAGAAGAGAACTGAGACCTCTTTGCTCACTGCTGTTATTTCAGCATCTCTTGCCACAATTACATGCTATCCTCTAGACACAGTGCGAAGGCAAATGCAATTGAAGGGTACACCTTATAAGACAGTATTAGATGCCATTTCAGGAATTGTAGCAAGGGATGGAGTTATCGGCTTGTATCGGGGATTTGTGCCAAATGCTTTGAAAAACCTACCAAATAGCAGCATCAGGCTTACTACATATGACATTTTCAAACGCCTAATTGCAGCTAGTGAGAAAGAGTTTCAAACAATTACCGAGGAAAACCGCAACAATCAAAAGAAACCCCAATGA 1137 0.4767 MAESEERASLTWRKIPVLKSSPNDVVPPLRDSVVVLHSAPGSGKRCNFASVSVAERKFDREFSPTAAQLLQHPLALGALVPKDAALFLAAAIAGAAAKSVTAPLDRIKLLMQTHGVRVGQESAKRAIGFIEAINVIGMEEGIKGYWKGNLPQVIRVIPYSAVQLFSYEFYKKIFKGKDGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVISASLATITCYPLDTVRRQMQLKGTPYKTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTTYDIFKRLIAASEKEFQTITEENRNNQKKPQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01281 378 PANTHER SOLUTE CARRIER FAMILY 25 73 356 - -
Phco1g01281 378 SUPERFAMILY Mitochondrial carrier 84 351 IPR023395 -
Phco1g01281 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 264 IPR018108 -
Phco1g01281 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 81 173 IPR018108 -
Phco1g01281 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 355 IPR018108 -
Phco1g01281 378 PRINTS Mitochondrial carrier protein signature 99 113 IPR002067 GO:0055085
Phco1g01281 378 PRINTS Mitochondrial carrier protein signature 86 99 IPR002067 GO:0055085
Phco1g01281 378 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Phco1g01281 378 PRINTS Mitochondrial carrier protein signature 280 302 IPR002067 GO:0055085
Phco1g01281 378 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Phco1g01281 378 PRINTS Mitochondrial carrier protein signature 237 255 IPR002067 GO:0055085
Phco1g01281 378 Gene3D Mitochondrial carrier domain 84 356 IPR023395 -
Phco1g01281 378 Pfam Mitochondrial carrier protein 86 176 IPR018108 -
Phco1g01281 378 Pfam Mitochondrial carrier protein 180 267 IPR018108 -
Phco1g01281 378 Pfam Mitochondrial carrier protein 275 357 IPR018108 -
Phco1g01281 378 FunFam Envelope ADP,ATP carrier protein 83 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01281 Phco-Chr1 22878372 22881798 Dispersed/Wgd