Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g01278 | ATGGCCGTCGTTGGCGTTCTCGCGCTACAAGGATCGTTCAACGAGCACATGGCTGCTCTTAGAAGGTTAGGAGTGAAAGGTGTGGAGATTCGAAAGCCGGAGCAGCTTCGCACCGTTACATCCCTCATCATCCCCGGTGGAGAAAGCACCACCATGGCTAAGCTCGCTGAGTATCATAACTTGTTTCCTGCCTTGAGAGAGTTTGTAAAATTGGGAAAGCCTGTTTGGGGAACCTGTGCAGGGCTTATATTCCTGGCAAATAAAGCTATAGGACAGAAGACTGGTGGACAAGATTTGGTTGGTGGACTTGATTGTACAGTGCATAGAAATTTCTTTGGTAGCCAGATTCAAAGCTTTGAGGCAGAGCTTTCAGTGCCACAGCTTGCCTCCCAGGAAGGTGGTCCTGAAACATTTCGTGGAGTTTTTATTCGTGCACCTGCAATTCTTGAAGCAGGGCCAGAAGTTCAAGTGTTGGCTGATTATCCCGTATCTTCTGACAGATTGTTAAGTTTTGATTCCTCTACTGGAGACAAAACGGAGAATGCTGAGGAAGAAAATAAGGTTATAGTTGCTGTGAGACAAGGGAACATACTAGGGACTGCTTTCCATCCTGAATTGACAGCTGATACTAGATGGCATAGTTATTTTGTGAAAATGTCAACAGAGGCTGGAGAAGAGGCCTCCTTAAGTAGCCTTGTTCCTGCACAAGTCAGCACAAGCCACTATCAACTGACCCGCAGTGACCTTCCCATCTTTCAATAG | 762 | 0.4659 | MAVVGVLALQGSFNEHMAALRRLGVKGVEIRKPEQLRTVTSLIIPGGESTTMAKLAEYHNLFPALREFVKLGKPVWGTCAGLIFLANKAIGQKTGGQDLVGGLDCTVHRNFFGSQIQSFEAELSVPQLASQEGGPETFRGVFIRAPAILEAGPEVQVLADYPVSSDRLLSFDSSTGDKTENAEEENKVIVAVRQGNILGTAFHPELTADTRWHSYFVKMSTEAGEEASLSSLVPAQVSTSHYQLTRSDLPIFQ | 253 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g01278 | 253 | Gene3D | - | 1 | 230 | IPR029062 | - | |
| Phco1g01278 | 253 | PANTHER | PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO | 1 | 223 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Phco1g01278 | 253 | PIRSF | Glut_amidoT_SNO | 1 | 224 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Phco1g01278 | 253 | CDD | GATase1_PB | 4 | 217 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Phco1g01278 | 253 | ProSiteProfiles | PdxT/SNO family profile. | 3 | 221 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Phco1g01278 | 253 | Pfam | SNO glutamine amidotransferase family | 6 | 220 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Phco1g01278 | 253 | NCBIfam | pyridoxal 5'-phosphate synthase glutaminase subunit PdxT | 4 | 161 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Phco1g01278 | 253 | Hamap | Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. | 4 | 219 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Phco1g01278 | 253 | ProSitePatterns | PdxT/SNO family family signature. | 41 | 51 | IPR021196 | - | |
| Phco1g01278 | 253 | SUPERFAMILY | Class I glutamine amidotransferase-like | 3 | 220 | IPR029062 | - | |
| Phco1g01278 | 253 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 3 | 226 | - | - | |
| Phco1g01278 | 253 | FunFam | Predicted protein | 1 | 230 | - | - |