Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01205 ATGGCTTTAGCCGTGGTAGGTGGTGCACTTCTCTCTGCTTTTTTTGATGTTCTTTTTGAAAGGCTAGCTTCCCCTGAGCTTGTCAACTTCATCCGTGGAAAGAAACCTGACAAGTTGCTTCAAAAGATGAAGAGCCAGCTGCTAATGGTTAAAGTTGTGCTTGCAGATGCTGAGAAGAGACAAATCACAGACTCCAATGTCAAAGAGTGGCTCGATCTTCTCAGAGATGTTGTCTACGAGGTTGACGACCTACTTGATGAAGTTTCTACTAAAGCTGCTACTCAAAAGGAGGTAAGCAATTCCTTTTCTCGCATTTTCAACAGGAAGAAGATTGTCAGTATTAGTAAGTTGGAAGGCATAGTTGAAAGATTAGATGACATTTTAAAACAAAAGGAGAGTCTTGATTTGAAGGAGATTCCAGTGGAGAGCAACCAGCCATGGATTGCTCAGCCAACATCTCTGGAAGATAGATATGAATTCAGTGATCCAGTCTCGGAAATTGAAATTTTAGACACAGTAAAATTTCCAAGAACTTTCTTGCCGATCAAGTTTAAAGATTCTCCATTCAACAACGAAAAGGCAACACTTATTATAGTGTCGGTGCTTCAGTACTTGAGAGTTTTATCTTTTTGTGGTTTTCAATGTCAGCTTCTGCCTGATTCATTAAGTGAATTGATCCATTTGCGTTATTTAAATCTCTCTGAAACAAGTATAGAAACACTGCCAGACTCATTGTGCAATTTGTACAATCTACAAACTTTGAAGTTGCATCGTTGCTTGAATCTGACTAAGTTGCCTAGTGCCATACAAAATCTCGTAAACTTGCGTCATCTTAAAATTCTTGAAACCCCAATAAAGGAGATGCCTAAAAGAATGGGAAAACTAAATCAATTACAGAGGTTGGATTTCTATATTGTGGGCAAGCATAAAGAGAATAGCATCAAAGAACTGGGAGGACTTCCAAATCTGCATGGTTCGTTTTCTATTACGGAATTGGAGAATGTTAGAAAAGGTGAAGAAGCATTAAAGGCCAGGATAATGGATAAGAAGCACATTAATCATCTATCCTTGGAATGGTCTAAAGGTAACTACGATGGCATCGACTTCGAAATTGAATTAGATGTACTCAGCAACTTACACCCTCACCAAGACCTGAAATGGCTGTCAATCAGCGGATATAAAGGAACCAGATTTCCCGAATGGGTTGGGAATTTTTTCTACCAAAATTTAACATATCTGTATTTAAAAGATTGTAACAACTGTTGCATGCTTCCTTCACTTGGGCAACTACCATCTCTCATGAACCTCTATATTTCAAACATGAATTCGGTGAAGACTATTGATGTAGGATTTTATAAGAAGGAAGATTGTTCATCTGTGACCGCCTTTCCCTCCCTTGAATCACTACACATTAATGACATGCCTTGTTGGGAGGTGTGGAGTTCCTCCTTCGATTCAGAAGCTTTTCCTGTGCTTAAAGTTCTTAATATACAAAACTGCCCCAAACTAAAGGGAGATTTGCCAAATCACTTGCATGCTCTGGAAACACTCAGGATTTCAAATTGCGAGCTTCTTGTCTCTTCTATCCCGGGGGGGCCCACCCTTCGAACATTAATGATATACAACAGCAACAAAGTAGCGTTTCATGTATTTCCTCTCTCGGTGGAACTTATAGAGATAAAAGGAGGCCCAATAGTGAAGTCCATGATGGAGGCCATCACTAACATCCAACCTACTTGCCTCCATTACTTGTCATTAAAGGATTGTTCGTCAGCCATATCTTTTCCAGGTGATCGTCTTCCTGCATCGCTGAAAACTCTTAAGATCAGTGGTTTAAGCAAATTGAATTTCCCGATGCAACACAAAAACGAAATACTGGAATCACTGTCAATAGATAAGAGTTGTGATTCGCTAAAGTCTCTCCCACTGGTTACCTTTCCAAACCTCTCTAGTCTTCGTATGGTAAACTGTGAAAATATGGAATCTCTTTTGGTCGTAGGGTCAGAGTCGTTTAAGAGTCTGAATTCTTTTTGGATTGGCCACTGCCCCAACTTTGTATCATTCCCTAAAGAAGGATTGTCTGCGCCCAATTTGACTAGTTTCAGTGTTCGTGGTTGGGAGATGTTGAAGTCGTTGCCCGACCAGATGGGAACTCTTATCCCAAAGATGGAATATCTTCAGATATCGAACTGCCAACAAATTGAGTCATTTCCAGGAGGGAGCATGCCACCTAACTTGAGAACAGTTGAGATATGGAATTGTGAGAAACTAGTGAGCGGCCAAGCATGGGTATCCAGGGACATGCTTACCTCTGTCGAGATCCACGGTCCTTGTGATGGCATCAACTCCTTCCCAAAGGAGGGATTGCTGCCTCCCTCCCTTACGTCTCTTTATCTAAGTTATTTGTCAAGTCTGGAGACGTTGGAGTGCAAGGGCCTTATCCATCTCACGTCGCTACAAGAATTAGCCATTGTAAGATGTGAAAAGCTGGAGAATATAAGGGGAGAAAGGTTGCCGGTCTCTCTAGTAAAATTAAGCATAAACGGATGTCCCTTGCTGCAAAAACGATGCCACAGAAAGGACAGTGAAATTTGGCCTAAAATGTGTCATGTCCGTGGGATAAAGATTGACGGAATTGTAATATACTGCCCTCACGTCATCACTTTTGAATTTGGGTTGAACGCATCTGACAGCAATATCCCAGCATGTGGAGGTTGA 2718 0.411 MALAVVGGALLSAFFDVLFERLASPELVNFIRGKKPDKLLQKMKSQLLMVKVVLADAEKRQITDSNVKEWLDLLRDVVYEVDDLLDEVSTKAATQKEVSNSFSRIFNRKKIVSISKLEGIVERLDDILKQKESLDLKEIPVESNQPWIAQPTSLEDRYEFSDPVSEIEILDTVKFPRTFLPIKFKDSPFNNEKATLIIVSVLQYLRVLSFCGFQCQLLPDSLSELIHLRYLNLSETSIETLPDSLCNLYNLQTLKLHRCLNLTKLPSAIQNLVNLRHLKILETPIKEMPKRMGKLNQLQRLDFYIVGKHKENSIKELGGLPNLHGSFSITELENVRKGEEALKARIMDKKHINHLSLEWSKGNYDGIDFEIELDVLSNLHPHQDLKWLSISGYKGTRFPEWVGNFFYQNLTYLYLKDCNNCCMLPSLGQLPSLMNLYISNMNSVKTIDVGFYKKEDCSSVTAFPSLESLHINDMPCWEVWSSSFDSEAFPVLKVLNIQNCPKLKGDLPNHLHALETLRISNCELLVSSIPGGPTLRTLMIYNSNKVAFHVFPLSVELIEIKGGPIVKSMMEAITNIQPTCLHYLSLKDCSSAISFPGDRLPASLKTLKISGLSKLNFPMQHKNEILESLSIDKSCDSLKSLPLVTFPNLSSLRMVNCENMESLLVVGSESFKSLNSFWIGHCPNFVSFPKEGLSAPNLTSFSVRGWEMLKSLPDQMGTLIPKMEYLQISNCQQIESFPGGSMPPNLRTVEIWNCEKLVSGQAWVSRDMLTSVEIHGPCDGINSFPKEGLLPPSLTSLYLSYLSSLETLECKGLIHLTSLQELAIVRCEKLENIRGERLPVSLVKLSINGCPLLQKRCHRKDSEIWPKMCHVRGIKIDGIVIYCPHVITFEFGLNASDSNIPACGG 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01205 905 SUPERFAMILY L domain-like 549 868 - -
Phco1g01205 905 Gene3D Ribonuclease Inhibitor 183 574 IPR032675 -
Phco1g01205 905 CDD RX-CC_like 28 127 IPR038005 -
Phco1g01205 905 Gene3D - 17 119 - -
Phco1g01205 905 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 511 758 - -
Phco1g01205 905 Pfam Rx N-terminal domain 11 100 IPR041118 -
Phco1g01205 905 Gene3D Ribonuclease Inhibitor 626 872 IPR032675 -
Phco1g01205 905 SUPERFAMILY L domain-like 199 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01205 Phco-Chr1 18531274 18536945 Dispersed/Proximal