Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01177 ATGGCTTTAGCCGTGGTGGGTGGTGCACTTCTCTCTGCTTTCCTTGACGTACTTTTTGAAAGACTAGCTTCCCCTGAGCTTGTCAACTTGATCCGTGGAAAGAAGCCTGACAAGTTGCTTCAAAAGGTGGAGAACCAGCTTATAGTTGTAAGAGTTGTGCTTGCTGATGCCGAGAATCGACAAATCTCAGACTCCAATGTCAAAAAGTGGCTCGGTGTTCTCAGAGATGTTATCTACCAGGTTGACGACTTACTTGATGAAGTTTCTACTAAAGCTGCTACTCACCAGGAGGTAAGCAATTCCTTTTCTCACCTTTTCAAAAGGAAGAAGATTCTTAGAATTAATAAGTTGGAAGACATAGTTGAAAGATTAGATGACATTTTAAAACAAAAGGAGAGTCTTGATTTGAAGGACATTCCAGTGGAGACACACCAGCCATGGAAAGCTCAGCCAACATCTCTGGAAGATGGATATGGTATGTGCGGTAGGGAGAAAGACAAGGAGGCCATAATGAAAATGGTGTTAGAGGACAGTGATGTCTCGGATATCAAAGTTTTCGACACAGTAAAATTTCCAAGAACTTTCTTGTCGATCTATTGTGAAGATTCTCAGTTCAACAACGAAAAGGCACCACTTATTATAGTGTCGATGCTTAAGTACTTGAGAGTTTTATCATTTTGTGGTTTCCGAAGTCAGCTTGCTCTGCCTGATTCAATAGGTGAATTGATCCATTTGCGTTATTTAAATCTCTCTCATACAAGTATTAAAACATTGCCGGAGTCATTGTGTAACATGTATAATCTACAGACTTTGAAGTTGAGTTGGTGCTTCAATCTGACTAAGTTGCCTAGTGCCATGCAAAATCTTACAAACTTGCGTCATCTTAAAATTCTTCAGACTCCCATAAAAGAGATGCCTAAAAGAATGGGGAAACTAAATCAATTACAGAGGTTGGACTTCTATATTGTGGGCAACCACAAAGAGAATAGCATCAAAGAATTGGGAGGACTTCCAAATCTCCATGGCTGGTTTTCTGTTAAAAAGTTAGAGAATGTAACAAAAGGTGAAGAAGCATCAGAGGCCAGGATAATGGATAAGAAGCACATTAATGATCTATCCTTGGAATGGTCTATAGGTAACGACAATATCATCGACTTCAAAATTGAATTAGATGTACTGAGCAAGTTACAACCTCACCAAGACCTGAAATCACTGTCAATATGCGGTTATAAAGGAACCAGGTTTCCTGAATGGGTGGAGAGTTTTTCCTACCAAAATATAACATATCTGTATTTAAAAAATTGTAACAACTGTTGCGTGCTTCCTTCACTTGGGCAACTACCGTCTCTCATGGGCCTCCGTATTTCAGACATGAATTCGGTGAAGACTATTGATGCAGGCTTTTATAAGAAGGAAGATTGTTCATCTGTTACGCCCTTTCCCTCCCTTCAATCTCTATACATTTATGATATGCCTTGTTGGGAGGTGTGGATTTCCCTCAATTCAGAAGCTTTTCCTGTGCTTAAGGATCTTTATATAAAGAACTGCCCCAAATTAAAGGGAGATTTTCCAAATCACCTTCCTGCTCTGCAAACACTCAAGATTACAAATTGCGAGCTGTTTGTCTCTTCCGTCCCAACGGCTCCCACCCTTCCAACGTTAGAGACTAAAAGCAACAAAGTAGGGTTTCATGTGCTTCTTCTTTTGGTGGAACATATACACATAGAAGGAAAGCCAATGGTAGAGTCCATGATGGAGGCCATCACTAACATCCAACCTACTTGCCTCCAATCTTTAACATTAAGGAATTGTTCGTCAGCCGTATCGTTTCCAGGTGATCGTCTTCCTGCGTCGCTGAAAAGTCTGTATATCAGTGGTTTAAAGAAACTGAAGTTCCCCATGCAACACACACACGAATTACTGGAATCACTGTCAATAAAGAATAGTTGTGATTCGCTCACGTCTCTTCCGCTGGTTACCTTTCCAAATCTCGTAAGTCTTATAATCACCAACTGTGAAAGTATGAAATCTCTTTTGGTCGTAGGGTCAGAGTCGTTTAAGAGACTCAATTCTATTGATATTAGCGACTGTCCCAACTTTGTATCATTCCCGGGAGGATTGTCTGCGCCCAATTTGACTCGTTTCATTGTTTGTAACTGTGAGAAGTTGAAGTCATTGCCCAATCAGATGTCTACTCTTCTCCCAAAGATGGAATATCTTGAGATATCGAACTGTCAACAAATTGAGTCATTTCCAGGAGGAAGTATGCCCACTAACTTGGGAACAGTTGAGATCAGGAACTGTGAGAAACTAGTGAGCCGCCAAGCATGGGTGTCTATGGACATGGTTACCACTGTCATTGTCAACGGTCCATGTGATGGCATCAAGTCCTTCTCAAAGGAGGGATTGCTGCCTCCCTCCCTTAAGAGTCTGCGTCTCTATAACTTCTCAAGTCTGGAGACGTTGAACTGCAAGGGCCTTCTGCATCTCACATCCCTGCAAAAATTGCACATTGAAAATTGTGAAAAGTTGGAGAATATCGGGGGAGAAAGGCTGCCTGTCTCTCTAATAAAATTAAGCATAAAGGAATGTCCCTTGCTGCAAAAACGATGTCACATAAAGGAGCGTGAAATTTGGGCTAAAATGTGTCATGTCCGTGGAATAAAGATAGACGGTAGATGGATTTAA 2688 0.4107 MALAVVGGALLSAFLDVLFERLASPELVNLIRGKKPDKLLQKVENQLIVVRVVLADAENRQISDSNVKKWLGVLRDVIYQVDDLLDEVSTKAATHQEVSNSFSHLFKRKKILRINKLEDIVERLDDILKQKESLDLKDIPVETHQPWKAQPTSLEDGYGMCGREKDKEAIMKMVLEDSDVSDIKVFDTVKFPRTFLSIYCEDSQFNNEKAPLIIVSMLKYLRVLSFCGFRSQLALPDSIGELIHLRYLNLSHTSIKTLPESLCNMYNLQTLKLSWCFNLTKLPSAMQNLTNLRHLKILQTPIKEMPKRMGKLNQLQRLDFYIVGNHKENSIKELGGLPNLHGWFSVKKLENVTKGEEASEARIMDKKHINDLSLEWSIGNDNIIDFKIELDVLSKLQPHQDLKSLSICGYKGTRFPEWVESFSYQNITYLYLKNCNNCCVLPSLGQLPSLMGLRISDMNSVKTIDAGFYKKEDCSSVTPFPSLQSLYIYDMPCWEVWISLNSEAFPVLKDLYIKNCPKLKGDFPNHLPALQTLKITNCELFVSSVPTAPTLPTLETKSNKVGFHVLLLLVEHIHIEGKPMVESMMEAITNIQPTCLQSLTLRNCSSAVSFPGDRLPASLKSLYISGLKKLKFPMQHTHELLESLSIKNSCDSLTSLPLVTFPNLVSLIITNCESMKSLLVVGSESFKRLNSIDISDCPNFVSFPGGLSAPNLTRFIVCNCEKLKSLPNQMSTLLPKMEYLEISNCQQIESFPGGSMPTNLGTVEIRNCEKLVSRQAWVSMDMVTTVIVNGPCDGIKSFSKEGLLPPSLKSLRLYNFSSLETLNCKGLLHLTSLQKLHIENCEKLENIGGERLPVSLIKLSIKECPLLQKRCHIKEREIWAKMCHVRGIKIDGRWI 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01177 895 Coils Coil 114 137 - -
Phco1g01177 895 SUPERFAMILY L domain-like 588 881 - -
Phco1g01177 895 SUPERFAMILY L domain-like 189 556 - -
Phco1g01177 895 Pfam Rx N-terminal domain 11 101 IPR041118 -
Phco1g01177 895 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 588 704 - -
Phco1g01177 895 Gene3D Ribonuclease Inhibitor 641 886 IPR032675 -
Phco1g01177 895 Gene3D Ribonuclease Inhibitor 195 595 IPR032675 -
Phco1g01177 895 Gene3D - 12 129 - -
Phco1g01177 895 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01177 Phco-Chr1 17523475 17527198 Proximal