Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01121 ATGGCATCAAGCGCGTATTTCTCTGTTCTTCTCCATGGCTTTGTGTTTATGGCTCTTGCAACTTCACCTTTCTCACAGTTGTCACCCGATTACTATTACTACACTTGCCCCAATGCTTTGAGCACAATCCAAAGGGTCGTAAGAGCTGCTGTGCAGAAAGAGCAACGCATGGGCGCATCCTTGCTACGTCTGCACTTTCACGATTGCTTTGTTAACAATGCAAAGCCTAATTTCAAATCTGCAAGAGGATTTGAGGTGGTGGATGAGATCAAGAAGGCAGTGGACGAAGCATGTGGAGAACCAGTTCTTTCATGCGCTGACATATTGGCTGTTGCTGCCCGAGACTCAGTGGTTGCAGGATATTTCAACCCGTATACAACAAACCTACCTTATACTTATTCCCTCTACCTTAATCCTTGCCCCTAA 426 0.4577 MASSAYFSVLLHGFVFMALATSPFSQLSPDYYYYTCPNALSTIQRVVRAAVQKEQRMGASLLRLHFHDCFVNNAKPNFKSARGFEVVDEIKKAVDEACGEPVLSCADILAVAARDSVVAGYFNPYTTNLPYTYSLYLNPCP 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01121 141 PANTHER PEROXIDASE 72-RELATED 23 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phco1g01121 141 Gene3D - 74 133 - -
Phco1g01121 141 Gene3D - 27 73 - -
Phco1g01121 141 PRINTS Haem peroxidase superfamily signature 103 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco1g01121 141 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco1g01121 141 SUPERFAMILY Heme-dependent peroxidases 26 120 IPR010255 GO:0004601|GO:0006979|GO:0020037
Phco1g01121 141 Pfam Peroxidase 44 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco1g01121 141 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Phco1g01121 141 ProSiteProfiles Plant heme peroxidase family profile. 26 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phco1g01121 141 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phco1g01121 141 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01121 Phco-Chr1 13592306 13593193 Wgd