Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g01115 | ATGGAGGGAAGAATGGGGCTTTTATTTCTGTTTTTGTTGGGTGCTGCTTGGGTTTGTGATGCAAGGGTGCTAGCAAACTGTGGTGAAGTAAACAGGAAATCAGATGTCTGTGAACTTTGTGAGGAATATACTGCTGAGGCCCTTGATTATCTAAATGATACAGAGAACCAGAGGGAGATTATTGATTCACTTCACAATAAATGTTATCAGATTCTCTCTTTCAAAGAGCAGTGCATTGAATTGGTGGATTATTATGCCCCACGTTTCTTCTCAGAAATCGCATCAGTTCTACCTAGAGAACTTTGCAAACAGGTCCACCTCTGCCAATCTGCAACCATTTCTTCACAAGTTCAAGGAAATACTTGTGACTCTTGCAAAGATACTGTTTCAACCATACTGGTTAAGTTGAATGATCCTGACACTAAGCTTGAGATAATGGAGGCACTGTTGAAAGCATGCAATTCTATGGATCAGTTGGCAAAGAAGTGCAAGAGGATGGTTTTTGAATATGGACCTTTGATTATTGTCAAAGCAGAGAAGTACCTGAAAACAACAGATATATGCACTGCATTACATGTTTGCCCAGCTTCCGCTGCAGTTAGCAACAAGGAAGCCTCAATCATGGAAGAAGTACCTCTGATTTCTGATTCTTAA | 654 | 0.4037 | MEGRMGLLFLFLLGAAWVCDARVLANCGEVNRKSDVCELCEEYTAEALDYLNDTENQREIIDSLHNKCYQILSFKEQCIELVDYYAPRFFSEIASVLPRELCKQVHLCQSATISSQVQGNTCDSCKDTVSTILVKLNDPDTKLEIMEALLKACNSMDQLAKKCKRMVFEYGPLIIVKAEKYLKTTDICTALHVCPASAAVSNKEASIMEEVPLISDS | 217 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g01115 | 217 | ProSiteProfiles | Saposin B type domain profile. | 33 | 112 | IPR008139 | - | |
| Phco1g01115 | 217 | SMART | sapb_4 | 120 | 194 | IPR008139 | - | |
| Phco1g01115 | 217 | SMART | sapb_4 | 35 | 108 | IPR008139 | - | |
| Phco1g01115 | 217 | Gene3D | - | 32 | 109 | - | - | |
| Phco1g01115 | 217 | Gene3D | - | 117 | 197 | - | - | |
| Phco1g01115 | 217 | PANTHER | SAPOSIN-RELATED | 24 | 203 | - | - | |
| Phco1g01115 | 217 | SUPERFAMILY | Saposin | 119 | 195 | IPR011001 | - | |
| Phco1g01115 | 217 | Pfam | Saposin-like type B, region 2 | 161 | 194 | IPR008138 | - | |
| Phco1g01115 | 217 | Pfam | Saposin-like type B, region 2 | 77 | 108 | IPR008138 | - | |
| Phco1g01115 | 217 | SUPERFAMILY | Saposin | 34 | 110 | IPR011001 | - | |
| Phco1g01115 | 217 | ProSiteProfiles | Saposin B type domain profile. | 118 | 198 | IPR008139 | - | |
| Phco1g01115 | 217 | FunFam | Pulmonary surfactant-associated protein B | 118 | 196 | - | - | |
| Phco1g01115 | 217 | Pfam | Saposin-like type B, region 1 | 121 | 156 | IPR007856 | GO:0006629 | |
| Phco1g01115 | 217 | Pfam | Saposin-like type B, region 1 | 35 | 70 | IPR007856 | GO:0006629 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco1g01115 | Phco-Chr1 | 13513884 | 13517908 | Dispersed/Wgd |