Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01110 ATGGGGAATCACAGGTTTAGATTATCAGATATGATTCCAAATGCTTGGTTTTACAAGCTGAGGGATATGGGAAAGGGAAGAAAGCAAAACACCACACTCTCTGGGAAGAAGAAGCAATCTTCCTCCACTTCAACCACACATTCATCAAAACCAAACCAACCCCTCCACCAATACAACAACAACAACCCCAGAAAGTCCTACTACATCACAAGAGACCTCAAAACCTCACCCTCAAACACCCCAAAGTTTTCCCCTCCAAGAAAATCAACCAAACAAAGAACCAAAAGAAGAGCCCCAAGAACCACAAAACTTGTATCCTCAGGTTGTAGCTGTCGCACCACCCTCGAATCCATGTGGACCAAATCAGATTCACCACAAGAACACTCTTCCTCATCCCCATTTGACTCCTCACCAGAGTCAGAGTCCCCAGAATTCAGAACAGACCGTGTTCTCCCGTGTTCTTCATCATTCGATGAAATGGTTTCCTTGTCAACCACCTCTTGCGCCTCTTGCAGGCTTAACACAAACAAAAAGAACACCACCAACGACATCATCATCGACGTGGACAAAAACTCCCTACCAAGAAAAGATAACAAGCTTGATGGCTACTACAATTACAACAACAACCACAACAACGACTATGATGACACCTTCTCAGAACTTGAGCTTCCTCCAATCATAACCAAGCCACCAAAGTTGCTAAAGAAGAGAGAACTCAAACAAGGGTCGTTGAAGGTGAGAATTGTGAAGGAAGAGTCTGCAATGAAGGAACAGAGGAACAATGGTTCTGTGAGGCGGTTCTCTGTGAATTCTCCGGGGGTGAGGTTGAGGGTCCACTCACCCAAAATCGCCGGCTGGAAGGGGCGGAAAAGTGTGTCGTCGACGGCGAGTTCTGGCTCCCGGAGAAGCCTCTCGGATAGTTTTGCGGTTGTGAAGTCTTCTTTTGACCCACAGAAGGATTTCAGGGAGTCTATGGTGGAGATGATTGTGGAGAACAACATAAGGGCATCCAAGGACTTGGAGGATCTACTTGCTTGCTACCTTTCTCTCAATTCAGATCAGTATCACGACCTCATCATCAAGGTCTTCAAGCAAATTTGGTTTGATTTGACTCAACCAAGGTAA 1125 0.4578 MGNHRFRLSDMIPNAWFYKLRDMGKGRKQNTTLSGKKKQSSSTSTTHSSKPNQPLHQYNNNNPRKSYYITRDLKTSPSNTPKFSPPRKSTKQRTKRRAPRTTKLVSSGCSCRTTLESMWTKSDSPQEHSSSSPFDSSPESESPEFRTDRVLPCSSSFDEMVSLSTTSCASCRLNTNKKNTTNDIIIDVDKNSLPRKDNKLDGYYNYNNNHNNDYDDTFSELELPPIITKPPKLLKKRELKQGSLKVRIVKEESAMKEQRNNGSVRRFSVNSPGVRLRVHSPKIAGWKGRKSVSSTASSGSRRSLSDSFAVVKSSFDPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDQYHDLIIKVFKQIWFDLTQPR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01110 374 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 371 IPR038933 GO:0045892
Phco1g01110 374 Pfam Transcriptional repressor, ovate 314 370 IPR006458 -
Phco1g01110 374 NCBIfam uncharacterized plant-specific domain TIGR01568 308 371 IPR006458 -
Phco1g01110 374 ProSiteProfiles OVATE domain profile. 310 369 IPR006458 -
Phco1g01110 374 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Phco1g01110 374 MobiDBLite consensus disorder prediction 101 140 - -
Phco1g01110 374 MobiDBLite consensus disorder prediction 26 147 - -
Phco1g01110 374 MobiDBLite consensus disorder prediction 27 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01110 Phco-Chr1 13370366 13371490 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco1g01110 Ovate 1.2e-24 No_clan