Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01093 ATGGATTATTCGGGCTACAACTACCAGCAGCAACCGCAACAACATTCCTATGGCTACGACCCTTCTCAGATCCAAATCCAACCCTACGATCAATCCTATGCTTATCAACAATACTACGCATACAATCCCCAATACGCCTATTTTCCCAACACACATCAAGGCCAGTTTCAATTCCAAGCCGAAACCGCTCCTCTTCACCCTCCCGGCGTCAACCCCACCGCTCCGGAGTCAGCCCCGACTGGACAATCTCAATACAGAGGTAGGGGTGGCAGGGGTGGTAGACCATTTAGAGGGGCTGGTCGTGGTCGGGGCCACAGTAGGGGCCATGGAGTAGGGGGTGGTAGACACATACCATCTCATTCTTCTGGAGCTGCTATTTCTCATGCGGCAGGCACACCTGTTGTTACTGGGACTGCTTCAGCGATAGAACCTTCATCAGTCTCTGTGCCAACACAATTACCTAAACCAGCTCGAGTGCAACCACCAGCACCACGTAAGGTATGTTGTGAAATTTGTAAGGTTGAGTGCAATACTCCAGAAATCTTGGAGCAACACAAGAATGGGAAGAAACATCAGAAGAATATGAGGGTGCATGAAGAATTGCAAAGGCGCAATGCTCTAAATGGTCAACAGAGTGGGCAAATTCCTACTTCTCAATTGAATTTAACAGATGAACCTAAGCAAGTTCAGGAGTCTGAGAAAAATGGATGCCCAGCCGAAATTATAGGCTCTGGGGTTATAGTTAATAATCACAACGAGGAAACTCAGCTGCAGAATAATGTAGGAAACATTTCTGAGGCTCCGGCTGAAGCACCTGAGGCAAAAAACATGGATAACTCTGCCGGAAGAGGCCGAGGATTAAAGCGGAAGAAGAAAGGAGGAAAAGGGGGTAAATACATGAGAACCAATGATGGTTTGAAGGCTGTGGAATCTGCACAAACCGTGTCTTTTAGATGTGAGTTGTGTGATGTTAAATGTGAGTCACAAATTGTTTACCAGAGTCATGTGACTGGGAAAAAGCACTTATCGAAACTAAGGCGTGCTCATGATCCCCAAGCTTCATCTGGAGTAGGCCTGCCGCAAGCTCTGTCTGGACCACTCTTGGGGCTTCAAGCCCTTTACCCTCCTGACATCAATGCTCTCTCTAATGCAATTAATGCTCAAGTACAACAAGGTGATAATGATCCACAGGTACTTTTGGCTCAGCTCCTGATGACTGTACTATCTCAAGCACAAGTTACAGCAACAGCACAAGTGACAGGTGTCACCGCTTCTCAGATGCCTGGACCCATATCTATGGCTGGACCAAGTTATGAACCCCAGTTGTTGCAGACACAAGTAGCAGAAATCGCAGCACATGCTAATTTGGAAAATCCTTCTGGGGAGGCAAAAACTGAGCCGTTGCCTGTCCCACCACTGGAGGCAAAAGCTCAGCAAGGTTCAACTGTCAGCACCCAAATTGAAGGTGGTGGTTCTGAAACTACTAAATAA 1491 0.4728 MDYSGYNYQQQPQQHSYGYDPSQIQIQPYDQSYAYQQYYAYNPQYAYFPNTHQGQFQFQAETAPLHPPGVNPTAPESAPTGQSQYRGRGGRGGRPFRGAGRGRGHSRGHGVGGGRHIPSHSSGAAISHAAGTPVVTGTASAIEPSSVSVPTQLPKPARVQPPAPRKVCCEICKVECNTPEILEQHKNGKKHQKNMRVHEELQRRNALNGQQSGQIPTSQLNLTDEPKQVQESEKNGCPAEIIGSGVIVNNHNEETQLQNNVGNISEAPAEAPEAKNMDNSAGRGRGLKRKKKGGKGGKYMRTNDGLKAVESAQTVSFRCELCDVKCESQIVYQSHVTGKKHLSKLRRAHDPQASSGVGLPQALSGPLLGLQALYPPDINALSNAINAQVQQGDNDPQVLLAQLLMTVLSQAQVTATAQVTGVTASQMPGPISMAGPSYEPQLLQTQVAEIAAHANLENPSGEAKTEPLPVPPLEAKAQQGSTVSTQIEGGGSETTK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01093 496 Gene3D Classic Zinc Finger 152 200 - -
Phco1g01093 496 Gene3D Classic Zinc Finger 298 348 - -
Phco1g01093 496 SUPERFAMILY beta-beta-alpha zinc fingers 314 347 IPR036236 -
Phco1g01093 496 SUPERFAMILY beta-beta-alpha zinc fingers 161 199 IPR036236 -
Phco1g01093 496 MobiDBLite consensus disorder prediction 1 20 - -
Phco1g01093 496 MobiDBLite consensus disorder prediction 62 125 - -
Phco1g01093 496 PANTHER OS06G0651300 PROTEIN-RELATED 7 413 - -
Phco1g01093 496 MobiDBLite consensus disorder prediction 457 496 - -
Phco1g01093 496 SMART ZnF_U1_5 314 348 IPR003604 GO:0003676|GO:0008270
Phco1g01093 496 SMART ZnF_U1_5 164 198 IPR003604 GO:0003676|GO:0008270
Phco1g01093 496 MobiDBLite consensus disorder prediction 268 299 - -
Phco1g01093 496 Pfam Zinc-finger of C2H2 type 317 341 - -
Phco1g01093 496 Pfam Zinc-finger of C2H2 type 169 191 - -
Phco1g01093 496 SMART c2h2final6 317 341 IPR013087 -
Phco1g01093 496 SMART c2h2final6 167 191 IPR013087 -
Phco1g01093 496 MobiDBLite consensus disorder prediction 477 496 - -
Phco1g01093 496 MobiDBLite consensus disorder prediction 143 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01093 Phco-Chr1 13046239 13051256 Dispersed