Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01076 ATGAGAGGGATGAGAATTGAGATGAGTGAAAAGAGACATGGAAATGAAAATGAGGGGAAATGGGAGATTGTTCTTTGTATTCATGCATTTTTTTGCAGCAAAAGCAATTTTATTCAACAACTGAATTCTGTACAGAAGATGGGGTGTTTCACTGTCCTGAAATACAAGAAGGAAAAGAGCAATAAAATCCGATACACAAAATGTGTCGGCCATAGTGAACATGTTCCTACAGTACTACCTGAACCTCAAACTCATACTCGTTCCCTGCAGTCTGCACCTTCTAGTTTTAGGAATAGAGTGAAATCCATTCATCCCATTAATAAAGTCACCAATTACAGAACGCGGGCATTATCTGCTCCATCAGCTCTTGATGTGGCCAGACAAGATACTCTTACCATAGTCGAGTTCAAGGATCAAGAGGAATCAAGATACAATGTGGGATCTCTGAAGGGGCAGCATTTATCTAATCCACAACCTTTACCACTTCCATCACACCAGGGTGGTGGTGAATTGAAAGCTACTAGCAGCTTTAAGTCAGGAATAGCTAGTGGTTCTCTGCATGGTCCTGATGCAGCAGAACAGGATGCTTTGGCCTCATTTGAGTATGAGGATCAAGAAGAGTCAAAACACCGAGTTGGATTGGTGAAGGATCATTGTTCAACTAATTCACAACCTTTGCCTCTTCCATCTCGTCAGGGTGGTGCTGCTGCATTGAAGGCTAATGTCAGCTTTAAGTCGGGAATGGCTACTGCTACTATACATGCTTCCGGACCTTTGCCTCTTCCACCTACTGGGTTGCTAAGAAACTTAACGTTTGAGGAGATTGCTGCTGCTTGTCATAACTTCTCTTCAGATCGATGCATGTCTGAATGTCTTTCTTCTACCATATATAGCGCTTCATTTGGTGATGATGCTTCAAATGCAAAGAAGTTTGAAGCCACTGTCACCCGCCTTCATTTGTCAACTCAGGGACTGAAGGAATTCATAAATGATGTTAATACCCTTGCATCGTTGCAACATCCAAACCTATGTAAATTGCTAGGATTTCATGCTCGTGATGGTTCTGAACCAAGAATGTTGGTTTATGAGAGGCTATACTATGGAAGCTTGGACCACCAGTTGTTTGGGAGATCTGATGGCCCTTCAATTGATTGGAACTCACGAATGAAAGTTGCCATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAGCAGCCAACATTCAGATTGACAAAGATTTCAGTGCAAAGCTTTCTGGGTATGGTTGTGTTGGACGAATTCCTGAGGAAGAGATTTCCAGTAGTTCATGTGCTGTGGGAAACCTGTCAGTGGAGACACTGGAAAGAGGAATTCTTACTCCAAAGAGCTATGTTTGGGGTTTTGGAATTATTCTTTTGGAGCTACTTACTGGCAGAAAGAATGTTGATAGTCATCACCCCAAGGAAGAGAGAAACTTGGTCAAGTGGAGCCGGCCTTTCCTGGCGGATGATTTTCGACTGTCGCTGATTATGGATCATCAACTTAAAGGTCGGTATCCTCCCAAGGCAGCCAGAGCAGTAGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCATCAGAAAGACCCACTATGAGAACCATTGTTGAGCATCTCAAAGTGGTTCAAGATATGAAGCACTCATGTTGGTTCCCACTTCAAGAACCAGCAAAACAAATGTCAAGATCACCAAGTCTTAATGGTATCAAATGTCTCACACCTACGTTGAGTTTCTCTCCCTCAGCAGCACCAGTAGCCAGACCATCTGTTTCATCTCCAAGATGGTGTGCTGTGCCCACATTGCATCTTCCTATTGGCGCTTGTTCCTCCACTTTCTCCATGAACGAGCTTGGTAGGCCGGAAAGCCGGAAGTCATCATCCTCACTGTGTAGGAGAGCTAGTGTTGAAGGATATTGA 1971 0.4353 MRGMRIEMSEKRHGNENEGKWEIVLCIHAFFCSKSNFIQQLNSVQKMGCFTVLKYKKEKSNKIRYTKCVGHSEHVPTVLPEPQTHTRSLQSAPSSFRNRVKSIHPINKVTNYRTRALSAPSALDVARQDTLTIVEFKDQEESRYNVGSLKGQHLSNPQPLPLPSHQGGGELKATSSFKSGIASGSLHGPDAAEQDALASFEYEDQEESKHRVGLVKDHCSTNSQPLPLPSRQGGAAALKANVSFKSGMATATIHASGPLPLPPTGLLRNLTFEEIAAACHNFSSDRCMSECLSSTIYSASFGDDASNAKKFEATVTRLHLSTQGLKEFINDVNTLASLQHPNLCKLLGFHARDGSEPRMLVYERLYYGSLDHQLFGRSDGPSIDWNSRMKVAICAAQGLTFLHEEGPFQAMYNEFSAANIQIDKDFSAKLSGYGCVGRIPEEEISSSSCAVGNLSVETLERGILTPKSYVWGFGIILLELLTGRKNVDSHHPKEERNLVKWSRPFLADDFRLSLIMDHQLKGRYPPKAARAVADIAQRCLQKEPSERPTMRTIVEHLKVVQDMKHSCWFPLQEPAKQMSRSPSLNGIKCLTPTLSFSPSAAPVARPSVSSPRWCAVPTLHLPIGACSSTFSMNELGRPESRKSSSSLCRRASVEGY 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01076 656 MobiDBLite consensus disorder prediction 635 656 - -
Phco1g01076 656 Gene3D Phosphorylase Kinase; domain 1 262 363 - -
Phco1g01076 656 Gene3D Transferase(Phosphotransferase) domain 1 366 568 - -
Phco1g01076 656 MobiDBLite consensus disorder prediction 144 190 - -
Phco1g01076 656 Pfam Protein tyrosine and serine/threonine kinase 310 557 IPR001245 GO:0004672|GO:0006468
Phco1g01076 656 MobiDBLite consensus disorder prediction 145 162 - -
Phco1g01076 656 SUPERFAMILY Protein kinase-like (PK-like) 262 567 IPR011009 -
Phco1g01076 656 MobiDBLite consensus disorder prediction 76 97 - -
Phco1g01076 656 ProSiteProfiles Protein kinase domain profile. 282 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g01076 656 MobiDBLite consensus disorder prediction 635 650 - -
Phco1g01076 656 MobiDBLite consensus disorder prediction 79 97 - -
Phco1g01076 656 PANTHER OS01G0588500 PROTEIN-RELATED 207 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01076 Phco-Chr1 12626770 12629859 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Phco1g01076 PK_Tyr_Ser-Thr 3.6e-24 CL0016